| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1870 |
|---|
| Symbol | |
|---|
| ID | 5590999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 1886932 |
|---|
| End bp | 1888215 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640921012 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001458564 |
|---|
| Protein GI | 157161246 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2718] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 0.188375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGT TTATTGACCG GCGTCTGAAC GGCAAAAACA AAAGCATGGT GAATCGCCAG
CGTTTTTTAC GCCGTTATAA AGCGCAAATT AAACAGTCGA TCTCCGAGGC CATTAATAAG
CGTTCGGTGA CTGACGTCGA CAGCGGCGAA TCCGTATCCA TTCCCACGGA AGATATTAGC
GAACCGATGT TTCATCAGGG GCGTGGCGGT CTGCGCCACC GCGTGCATCC GGGCAATGAC
CATTTCGTCC AGAACGACCG AATTGAACGT CCCCAGGGTG GCGGCGGAGG TTCCGGCAGT
GGTCAGGGCC AGGCCAGCCA GGATGGTGAA GGTCAGGATG AATTTGTCTT TCAGATTTCG
AAAGATGAGT ATCTTGATCT GCTCTTTGAA GATTTGGCCT TACCGAATCT GAAACAAAAC
CAACAACGCC AGCTGACCGA ATATAAAACG CATCGGGCGG GTTATACCGC TAACGGCGTT
CCGGCCAATA TCAGCGTTGT GCGTTCATTG CAGAACTCAC TGGCGCGACG CACAGCCATG
ACGGCAGGCA AGCGGCGGGA ACTTCATGCA CTGGAAGAGA ATTTGGCCAT CATCAGCAAC
AGTGAACCTG CGCAACTGCT GGAAGAGGAA CGTCTGCGCA AAGAAATTGC AGAATTACGT
GCCAAAATTG AACGCGTCCC TTTTATTGAC ACCTTCGATT TACGTTACAA GAACTACGAG
AAGCGGCCCG ATCCCTCCAG CCAGGCAGTG ATGTTTTGCC TGATGGACGT TTCCGGTTCA
ATGGATCAAT CCACTAAAGA TATGGCTAAG CGTTTTTATG TTCTGCTGTA TCTGTTCCTC
AGCAGAACGT ATAAGAACGT GGAAGTCGTA TACATCCGCC ATCATACCCA GGCGAAAGAA
GTCGATGAAC ATGAGTTTTT CTACTCGCAG GAAACAGGCG GCACCATTGT TTCCAGCGCC
CTGAAACTGA TGGATGAGGT AGTGAAAGAG CGTTATAACC CGGCACAGTG GAATATTTAC
GCTGCACAAG CATCGGACGG CGATAACTGG GCCGATGACT CTCCGCTTTG CCATGAAATC
CTGGCGAAAA AATTATTACC TGTTGTTCGT TATTACAGCT ATATCGAAAT TACCCGTCGT
GCACATCAGA CATTGTGGCG AGAATATGAG CATCTGCAAT CTACTTTCGA CAACTTTGCG
ATGCAGCACA TCCGCGACCA GGATGATATT TATCCGGTGT TCCGTGAACT GTTTCATAAA
CAAAATGCAA CAGCTAAAGA CTAA
|
|---|
| Protein sequence | MTWFIDRRLN GKNKSMVNRQ RFLRRYKAQI KQSISEAINK RSVTDVDSGE SVSIPTEDIS
EPMFHQGRGG LRHRVHPGND HFVQNDRIER PQGGGGGSGS GQGQASQDGE GQDEFVFQIS
KDEYLDLLFE DLALPNLKQN QQRQLTEYKT HRAGYTANGV PANISVVRSL QNSLARRTAM
TAGKRRELHA LEENLAIISN SEPAQLLEEE RLRKEIAELR AKIERVPFID TFDLRYKNYE
KRPDPSSQAV MFCLMDVSGS MDQSTKDMAK RFYVLLYLFL SRTYKNVEVV YIRHHTQAKE
VDEHEFFYSQ ETGGTIVSSA LKLMDEVVKE RYNPAQWNIY AAQASDGDNW ADDSPLCHEI
LAKKLLPVVR YYSYIEITRR AHQTLWREYE HLQSTFDNFA MQHIRDQDDI YPVFRELFHK
QNATAKD
|
|---|
| |