Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1860 |
Symbol | ydjK |
ID | 5590956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1876827 |
End bp | 1878206 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640921002 |
Product | major facilitator family transporter |
Protein accession | YP_001458554 |
Protein GI | 157161236 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.0174535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACAGA TAACAAAACC GCATTGTGGT GCACGGCTGG ATCGCTTACC TGATTGCCGC TGGCATTCGT CAATGTTTGC CATCGTCGCG TTTGGCTTGC TTGTCTGCTG GAGTAATGCC GTTGGTGGCT TGATCCTCGC GCAGCTGAAA GCGTTGGGCT GGACAGATAA TTCCACCACA GCCACATTCT CAGCAATCAC GACCGCCGGA ATGTTTCTCG GTGCGCTGGT GGGCGGCATC ATTGGCGACA AAACCGGTCG TAGAAATGCG TTCATCCTCT ATGAGGCCAT TCATATTGCC TCGATGGTTG TCGGTGCTTT CTCACCGAAT ATGGATTTTC TTATTGCCTG CCGTTTTGTG ATGGGCGTTG GGCTGGGAGC TTTACTGGTT ACGCTGTTTG CTGGTTTCAC CGAATATATG CCCGGTAGAA ATCGCGGAAC GTGGTCCAGT CGGGTTTCCT TTATTGGCAA CTGGTCATAT CCGCTCTGTT CATTGATTGT GATGGGACTC ACGCCGCTGA TTAGTGCTGA GTGGAACTGG CGGGTACAAC TGCTTATCCC TGCAATATTG TCGCTTATCG CTACGGCGCT GGCCTGGCGC TACTTTCCTG AATCCCCGCG CTGGCTGGAA TCGCGCGGAC GGTATCAGGA AGCCGAGAAA GTCATGCGGA GTATAGAAGA AGGCGTCATA CGCCAGACGG GTAAACCTTT GCCGCCTGTG GTTATTGCTG ATGACGGTAA AGCGCCACAA GCGGTGCCGT ATTCAGCCTT ACTGACAGGA GTATTACTGA AACGCGTGAT ATTAGGCTCT TGTGTGCTGA TTGCCATGAA CGTTGTGCAG TACACACTAA TTAACTGGTT GCCAACAATA TTCATGACCC AGGGGATTAA TTTAAAAGAC TCGATTGTTT TAAATACCAT GAGTATGTTT GGCGCGCCAT TTGGTATTTT TATTGCCATG CTGGTGATGG ATAAAATTCC GCGTAAAACA ATGGGTGTGG GGCTATTAAT CCTGATTGCG GTGCTCGGAT ATATCTATTC ACTGCAAACC AGTATGTTGC TCATAACGTT GATTGGTTTC TTCCTGATTA CTTTCGTCTA TATGTACGTT TGCTATGCCT CGGCAGTGTA TGTCCCTGAA ATCTGGCCGA CAGAGGCCAA ACTCCGTGGC TCCGGTCTGG CGAATGCGGT AGGGCGAATC AGTGGTATTG CCGCACCTTA TGCCGTTGCA GTGCTGCTCA GTAGTTATGG CGTAACGGGA GTCTTTATTC TTCTGGGGGC TGTTTCAATT GTTGTCGCAA TTGCTATCGC CACCATTGGA ATTGAAACCA AAGGTGTCTC CGTTGAAAGT TTAAGTATTG ATGCAGTAGC CAATAAATGA
|
Protein sequence | MEQITKPHCG ARLDRLPDCR WHSSMFAIVA FGLLVCWSNA VGGLILAQLK ALGWTDNSTT ATFSAITTAG MFLGALVGGI IGDKTGRRNA FILYEAIHIA SMVVGAFSPN MDFLIACRFV MGVGLGALLV TLFAGFTEYM PGRNRGTWSS RVSFIGNWSY PLCSLIVMGL TPLISAEWNW RVQLLIPAIL SLIATALAWR YFPESPRWLE SRGRYQEAEK VMRSIEEGVI RQTGKPLPPV VIADDGKAPQ AVPYSALLTG VLLKRVILGS CVLIAMNVVQ YTLINWLPTI FMTQGINLKD SIVLNTMSMF GAPFGIFIAM LVMDKIPRKT MGVGLLILIA VLGYIYSLQT SMLLITLIGF FLITFVYMYV CYASAVYVPE IWPTEAKLRG SGLANAVGRI SGIAAPYAVA VLLSSYGVTG VFILLGAVSI VVAIAIATIG IETKGVSVES LSIDAVANK
|
| |