Gene EcHS_A1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1860 
SymbolydjK 
ID5590956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1876827 
End bp1878206 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content49% 
IMG OID640921002 
Productmajor facilitator family transporter 
Protein accessionYP_001458554 
Protein GI157161236 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0174535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGA TAACAAAACC GCATTGTGGT GCACGGCTGG ATCGCTTACC TGATTGCCGC 
TGGCATTCGT CAATGTTTGC CATCGTCGCG TTTGGCTTGC TTGTCTGCTG GAGTAATGCC
GTTGGTGGCT TGATCCTCGC GCAGCTGAAA GCGTTGGGCT GGACAGATAA TTCCACCACA
GCCACATTCT CAGCAATCAC GACCGCCGGA ATGTTTCTCG GTGCGCTGGT GGGCGGCATC
ATTGGCGACA AAACCGGTCG TAGAAATGCG TTCATCCTCT ATGAGGCCAT TCATATTGCC
TCGATGGTTG TCGGTGCTTT CTCACCGAAT ATGGATTTTC TTATTGCCTG CCGTTTTGTG
ATGGGCGTTG GGCTGGGAGC TTTACTGGTT ACGCTGTTTG CTGGTTTCAC CGAATATATG
CCCGGTAGAA ATCGCGGAAC GTGGTCCAGT CGGGTTTCCT TTATTGGCAA CTGGTCATAT
CCGCTCTGTT CATTGATTGT GATGGGACTC ACGCCGCTGA TTAGTGCTGA GTGGAACTGG
CGGGTACAAC TGCTTATCCC TGCAATATTG TCGCTTATCG CTACGGCGCT GGCCTGGCGC
TACTTTCCTG AATCCCCGCG CTGGCTGGAA TCGCGCGGAC GGTATCAGGA AGCCGAGAAA
GTCATGCGGA GTATAGAAGA AGGCGTCATA CGCCAGACGG GTAAACCTTT GCCGCCTGTG
GTTATTGCTG ATGACGGTAA AGCGCCACAA GCGGTGCCGT ATTCAGCCTT ACTGACAGGA
GTATTACTGA AACGCGTGAT ATTAGGCTCT TGTGTGCTGA TTGCCATGAA CGTTGTGCAG
TACACACTAA TTAACTGGTT GCCAACAATA TTCATGACCC AGGGGATTAA TTTAAAAGAC
TCGATTGTTT TAAATACCAT GAGTATGTTT GGCGCGCCAT TTGGTATTTT TATTGCCATG
CTGGTGATGG ATAAAATTCC GCGTAAAACA ATGGGTGTGG GGCTATTAAT CCTGATTGCG
GTGCTCGGAT ATATCTATTC ACTGCAAACC AGTATGTTGC TCATAACGTT GATTGGTTTC
TTCCTGATTA CTTTCGTCTA TATGTACGTT TGCTATGCCT CGGCAGTGTA TGTCCCTGAA
ATCTGGCCGA CAGAGGCCAA ACTCCGTGGC TCCGGTCTGG CGAATGCGGT AGGGCGAATC
AGTGGTATTG CCGCACCTTA TGCCGTTGCA GTGCTGCTCA GTAGTTATGG CGTAACGGGA
GTCTTTATTC TTCTGGGGGC TGTTTCAATT GTTGTCGCAA TTGCTATCGC CACCATTGGA
ATTGAAACCA AAGGTGTCTC CGTTGAAAGT TTAAGTATTG ATGCAGTAGC CAATAAATGA
 
Protein sequence
MEQITKPHCG ARLDRLPDCR WHSSMFAIVA FGLLVCWSNA VGGLILAQLK ALGWTDNSTT 
ATFSAITTAG MFLGALVGGI IGDKTGRRNA FILYEAIHIA SMVVGAFSPN MDFLIACRFV
MGVGLGALLV TLFAGFTEYM PGRNRGTWSS RVSFIGNWSY PLCSLIVMGL TPLISAEWNW
RVQLLIPAIL SLIATALAWR YFPESPRWLE SRGRYQEAEK VMRSIEEGVI RQTGKPLPPV
VIADDGKAPQ AVPYSALLTG VLLKRVILGS CVLIAMNVVQ YTLINWLPTI FMTQGINLKD
SIVLNTMSMF GAPFGIFIAM LVMDKIPRKT MGVGLLILIA VLGYIYSLQT SMLLITLIGF
FLITFVYMYV CYASAVYVPE IWPTEAKLRG SGLANAVGRI SGIAAPYAVA VLLSSYGVTG
VFILLGAVSI VVAIAIATIG IETKGVSVES LSIDAVANK