Gene EcHS_A1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1853 
SymbolydjE 
ID5591084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1870703 
End bp1872061 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content45% 
IMG OID640920997 
Productmajor facilitator family transporter 
Protein accessionYP_001458549 
Protein GI157161231 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.0220731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAT ATGATCAAAT TGGCACAAGA CTGGACCGCT TGCCTTTGGC CCGGTTTCAT 
TATCGTATAT TTGGTATAAT AAGCTTTAGT CTGTTATTAA CGGGTTTTTT GAGTTACTCC
GGTAATGTTG TCTTAGCAAA GCTGGTAAGC AATGGATGGT CAAATAATTT CCTCAATGCC
GCCTTTACCT CGGCATTAAT GTTTGGTTAT TTCATCGGCT CTCTTACCGG TGGGTTCATC
GGTGATTACT TTGGGCGGCG CAGGGCGTTT CGCATAAATC TTCTCATCGT CGGTATTGCT
GCAACAGGGG CCGCTTTTGT CCCTGATATG TACTGGCTCA TCTTCTTTCG CTTCCTGATG
GGAACAGGAA TGGGGGCGCT GATTATGGTT GGCTATGCCT CATTTACGGA GTTTATCCCC
GCGACGGTGC GTGGAAAATG GTCCGCGCGG CTCTCATTTG TTGGTAACTG GTCGCCCATG
CTGTCTGCGG CGATAGGTGT GGTGGTTATC GCTTTTTTTA GTTGGCGGAT AATGTTTCTG
TTGGGTGGTA TTGGCATACT GTTAGCCTGG CTTCTCTCAG GTAAATACTT TATTGAGTCG
CCACGATGGC TGGCAGGGAA AGGGCAAATC GCAGGTGCAG AATGCCAACT TCGTGAAGTA
GAGCAGCAAA TTGAAAGAGA GAAGAGTATT CGTTTACCCC CGCTTACTTC GTATCAGAGC
AACAGCAAAG TTAAAGTAAT CAAGGGTACT TTCTGGCTCC TGTTTAAAGG TGAAATGTTA
CGACGTACAT TAGTCGCGAT TACTGTTTTA ATTGCAATGA ACATTTCGCT TTATACCATC
ACCGTATGGA TACCGACCAT ATTTGTTAAC CCCGGCATTG ATGTCGATAA ATCAATATTA
ATGACCGCTG TTATTATGAT TGGCGCTCCG GTAGGAATAT TTATTGCGGC ATTAATTATT
GATCATTTTC CTCGTCGGTT ATTTGGCTCC ACCTTACTTA TTATTATTGC CGTGTTAGGC
TATATCTATT CAATTCAGAC TACAGAGTGG GCGATTTTAA TCTATGGCCT GGTGATGATC
TTCTTTTTAT ACATGTATGT TTGCTTCGCG TCGGCGGTTT ATATCCCGGA GCTTTGGCCA
ACGCATTTAC GCCTGCGCGG TTCGGGTTTC GTTAATGCCG TCGGACGGAT CGTCGCAGTC
TTCACGCCCT ATGGCGTTGC GGCATTATTA ACACATTATG GGTCGATCAC GGTGTTTATA
GTACTTGGTG TCATGTTATT GCTCTGTGCG CTGGTTCTCT CCATTTTTGG CATCGAAACG
CGGAAGGTGT CGTTGGAAGA GATTTCTGAG GTGAATTAA
 
Protein sequence
MEQYDQIGTR LDRLPLARFH YRIFGIISFS LLLTGFLSYS GNVVLAKLVS NGWSNNFLNA 
AFTSALMFGY FIGSLTGGFI GDYFGRRRAF RINLLIVGIA ATGAAFVPDM YWLIFFRFLM
GTGMGALIMV GYASFTEFIP ATVRGKWSAR LSFVGNWSPM LSAAIGVVVI AFFSWRIMFL
LGGIGILLAW LLSGKYFIES PRWLAGKGQI AGAECQLREV EQQIEREKSI RLPPLTSYQS
NSKVKVIKGT FWLLFKGEML RRTLVAITVL IAMNISLYTI TVWIPTIFVN PGIDVDKSIL
MTAVIMIGAP VGIFIAALII DHFPRRLFGS TLLIIIAVLG YIYSIQTTEW AILIYGLVMI
FFLYMYVCFA SAVYIPELWP THLRLRGSGF VNAVGRIVAV FTPYGVAALL THYGSITVFI
VLGVMLLLCA LVLSIFGIET RKVSLEEISE VN