Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1853 |
Symbol | ydjE |
ID | 5591084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1870703 |
End bp | 1872061 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640920997 |
Product | major facilitator family transporter |
Protein accession | YP_001458549 |
Protein GI | 157161231 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.0220731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAAT ATGATCAAAT TGGCACAAGA CTGGACCGCT TGCCTTTGGC CCGGTTTCAT TATCGTATAT TTGGTATAAT AAGCTTTAGT CTGTTATTAA CGGGTTTTTT GAGTTACTCC GGTAATGTTG TCTTAGCAAA GCTGGTAAGC AATGGATGGT CAAATAATTT CCTCAATGCC GCCTTTACCT CGGCATTAAT GTTTGGTTAT TTCATCGGCT CTCTTACCGG TGGGTTCATC GGTGATTACT TTGGGCGGCG CAGGGCGTTT CGCATAAATC TTCTCATCGT CGGTATTGCT GCAACAGGGG CCGCTTTTGT CCCTGATATG TACTGGCTCA TCTTCTTTCG CTTCCTGATG GGAACAGGAA TGGGGGCGCT GATTATGGTT GGCTATGCCT CATTTACGGA GTTTATCCCC GCGACGGTGC GTGGAAAATG GTCCGCGCGG CTCTCATTTG TTGGTAACTG GTCGCCCATG CTGTCTGCGG CGATAGGTGT GGTGGTTATC GCTTTTTTTA GTTGGCGGAT AATGTTTCTG TTGGGTGGTA TTGGCATACT GTTAGCCTGG CTTCTCTCAG GTAAATACTT TATTGAGTCG CCACGATGGC TGGCAGGGAA AGGGCAAATC GCAGGTGCAG AATGCCAACT TCGTGAAGTA GAGCAGCAAA TTGAAAGAGA GAAGAGTATT CGTTTACCCC CGCTTACTTC GTATCAGAGC AACAGCAAAG TTAAAGTAAT CAAGGGTACT TTCTGGCTCC TGTTTAAAGG TGAAATGTTA CGACGTACAT TAGTCGCGAT TACTGTTTTA ATTGCAATGA ACATTTCGCT TTATACCATC ACCGTATGGA TACCGACCAT ATTTGTTAAC CCCGGCATTG ATGTCGATAA ATCAATATTA ATGACCGCTG TTATTATGAT TGGCGCTCCG GTAGGAATAT TTATTGCGGC ATTAATTATT GATCATTTTC CTCGTCGGTT ATTTGGCTCC ACCTTACTTA TTATTATTGC CGTGTTAGGC TATATCTATT CAATTCAGAC TACAGAGTGG GCGATTTTAA TCTATGGCCT GGTGATGATC TTCTTTTTAT ACATGTATGT TTGCTTCGCG TCGGCGGTTT ATATCCCGGA GCTTTGGCCA ACGCATTTAC GCCTGCGCGG TTCGGGTTTC GTTAATGCCG TCGGACGGAT CGTCGCAGTC TTCACGCCCT ATGGCGTTGC GGCATTATTA ACACATTATG GGTCGATCAC GGTGTTTATA GTACTTGGTG TCATGTTATT GCTCTGTGCG CTGGTTCTCT CCATTTTTGG CATCGAAACG CGGAAGGTGT CGTTGGAAGA GATTTCTGAG GTGAATTAA
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Protein sequence | MEQYDQIGTR LDRLPLARFH YRIFGIISFS LLLTGFLSYS GNVVLAKLVS NGWSNNFLNA AFTSALMFGY FIGSLTGGFI GDYFGRRRAF RINLLIVGIA ATGAAFVPDM YWLIFFRFLM GTGMGALIMV GYASFTEFIP ATVRGKWSAR LSFVGNWSPM LSAAIGVVVI AFFSWRIMFL LGGIGILLAW LLSGKYFIES PRWLAGKGQI AGAECQLREV EQQIEREKSI RLPPLTSYQS NSKVKVIKGT FWLLFKGEML RRTLVAITVL IAMNISLYTI TVWIPTIFVN PGIDVDKSIL MTAVIMIGAP VGIFIAALII DHFPRRLFGS TLLIIIAVLG YIYSIQTTEW AILIYGLVMI FFLYMYVCFA SAVYIPELWP THLRLRGSGF VNAVGRIVAV FTPYGVAALL THYGSITVFI VLGVMLLLCA LVLSIFGIET RKVSLEEISE VN
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