Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1845 |
Symbol | gdhA |
ID | 5590996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | + |
Start bp | 1860453 |
End bp | 1861796 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640920989 |
Product | glutamate dehydrogenase |
Protein accession | YP_001458541 |
Protein GI | 157161223 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.0654574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCAGA CATATTCTCT GGAGTCATTC CTCAACCATG TCCAAAAGCG CGACCCGAAT CAAACCGAGT TCGCGCAAGC CGTTCGTGAA GTAATGACCA CACTCTGGCC TTTTCTTGAA CAAAATCCAA AATATCGCCA GATGTCATTA CTGGAGCGTC TGGTTGAACC GGAGCGCGTG ATCCAGTTTC GCGTGGTATG GGTTGATGAT CGCAACCAGA TACAGGTCAA CCGTGCATGG CGTGTGCAGT TCAGCTCTGC CATCGGCCCG TACAAAGGCG GTATGCGCTT CCATCCGTCA GTTAACCTTT CCATTCTCAA ATTCCTCGGC TTTGAACAAA CCTTCAAAAA TGCCCTGACT ACCCTGCCGA TGGGCGGTGG TAAAGGCGGC AGCGATTTCG ATCCGAAAGG AAAAAGCGAA GGTGAAGTGA TGCGTTTTTG CCAGGCGCTG ATGACCGAGC TTTATCGTCA TCTGGGCGCG GATACCGACG TTCCGGCAGG TGATATCGGG GTTGGTGGTC GTGAAGTCGG CTTTATGGCG GGGATGATGA AAAAGCTCTC CAACAATACC GCCTGCGTCT TCACCGGTAA GGGCCTTTCA TTTGGCGGCA GTCTTATTCG CCCGGAAGCT ACCGGCTACG GTCTGGTTTA TTTCACAGAA GCAATGTTAA AACGCCACGG TATGGGTTTT GAAGGGATGC GCGTTTCCGT TTCTGGCTCC GGCAACGTCG CCCAGTACGC TATCGAAAAA GCGATGGAAT TTGGTGCTCG TGTGATCACT GCGTCAGACT CCAGCGGCAC TGTAGTTGAT GAAAGCGGAT TCACGAAAGA GAAACTGGCA CGTCTTATCG AAATCAAAGC CAGCCGCGAT GGTCGAGTGG CAGATTACGC CAAAGAATTT GGTCTGGTCT ATCTCGAAGG CCAACAGCCG TGGTCTCTAC CGGTTGATAT CGCCCTGCCT TGCGCCACCC AGAATGAACT GGATGTTGAC GCCGCGCATC AGCTTATCGC TAATGGCGTT AAAGCCGTCG CCGAAGGGGC AAATATGCCG ACCACCATCG AAGCGACTGA ACTGTTCCAG CAGGCAGGCG TACTATTTGC ACCGGGTAAA GCGGCTAATG CTGGTGGCGT CGCTACATCG GGCCTGGAAA TGGCACAAAA CGCTGCGCGC CTGGGCTGGA AAGCCGAGAA AGTTGACGCA CGTTTGCATC ACATCATGCT GGATATCCAC CATGCCTGTG TTGAGCATGG TGGTGAAGGT GAGCAAACCA ACTACGTGCA GGGCGCGAAC ATTGCCGGTT TTGTGAAGGT TGCCGATGCG ATGCTGGCGC AGGGTGTGAT TTAA
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Protein sequence | MDQTYSLESF LNHVQKRDPN QTEFAQAVRE VMTTLWPFLE QNPKYRQMSL LERLVEPERV IQFRVVWVDD RNQIQVNRAW RVQFSSAIGP YKGGMRFHPS VNLSILKFLG FEQTFKNALT TLPMGGGKGG SDFDPKGKSE GEVMRFCQAL MTELYRHLGA DTDVPAGDIG VGGREVGFMA GMMKKLSNNT ACVFTGKGLS FGGSLIRPEA TGYGLVYFTE AMLKRHGMGF EGMRVSVSGS GNVAQYAIEK AMEFGARVIT ASDSSGTVVD ESGFTKEKLA RLIEIKASRD GRVADYAKEF GLVYLEGQQP WSLPVDIALP CATQNELDVD AAHQLIANGV KAVAEGANMP TTIEATELFQ QAGVLFAPGK AANAGGVATS GLEMAQNAAR LGWKAEKVDA RLHHIMLDIH HACVEHGGEG EQTNYVQGAN IAGFVKVADA MLAQGVI
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