Gene EcHS_A1837 details

Gene Information

• Locus tag: EcHS_A1837
• ID: 5592128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1853597
• End bp: 1854145
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640920981
• Product: carboxymuconolactone decarboxylase family protein
• Protein accession: YP_001458533
• Protein GI: 157161215
• COG category: [S] Function unknown
• COG ID: [COG2128] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00778] alkylhydroperoxidase AhpD family core domain

Plasmid Coverage information

• Num covering plasmid clones: 80
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTTTAC CGCCGCTTAG CAAAATTCCT TTAATTTTAC GTCCACAGGC GTGGCTGCAT 
CGTCGCCATT ACGGCGAGGT GCTAAGCCCC ATTCGCTGGT GGGGGCGGAT CCCGTTTATC 
TTTTATCTGG TGTCGATGTT TGTTGGCTGG CTGGAGCGCA AACGCTCACC GCTCGATCCG 
GTAGTACGAT CGCTTGTCAG CGCGCGCATT GCGCAAATGT GCCTGTGTGA GTTTTGTGTG 
GATATCACCA GTATGAAAGT CGCCGAGCGC ACCGGCAGCA GCGATAAACT GCTGGCAGTG 
GCTGACTGGC GGCAAAGCCC GCTCTTTAGC GATGAAGAAC GGCTGGCGCT GGAGTACGCC 
GAAGCCGCAA GCGTAACGCC GCCAACGGTC GATGATGCCC TGCGTACCCG ACTGGCTGCG 
CATTTTGACG CTCAGGCGCT CACCGAACTG ACGGCATTGA TCGGCCTGCA AAATCTGTCA 
GCCCGTTTTA ATTCTGCCAT GGACATTCCC GCTCAGGGGC TGTGCCGTAT TCCTGAAAAA 
CGTTCTTAA 

 

Protein sequence

MGLPPLSKIP LILRPQAWLH RRHYGEVLSP IRWWGRIPFI FYLVSMFVGW LERKRSPLDP 
VVRSLVSARI AQMCLCEFCV DITSMKVAER TGSSDKLLAV ADWRQSPLFS DEERLALEYA 
EAASVTPPTV DDALRTRLAA HFDAQALTEL TALIGLQNLS ARFNSAMDIP AQGLCRIPEK 
RS