Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1825 |
Symbol | spy |
ID | 5591694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1843222 |
End bp | 1843707 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640920969 |
Product | periplasmic protein |
Protein accession | YP_001458521 |
Protein GI | 157161203 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAAAT TAACTGCACT GTTTGTTGCC TCTACCCTGG CTCTTGGCGC GGCTAACCTG GCCCATGCCG CAGACACCAC TACCGCAGCA CCGGCTGACG CGAAGCCGAT GATGCACCAC AAAGGCAAGT TCGGTCCGCA TCAGGACATG ATGTTCAAAG ACCTGAACCT GACCGACGCG CAGAAACAGC AGATCCGCGA AATCATGAAA GGCCAGCGTG ACCAGATGAA ACGTCCGCCG CTGGAAGAAC GCCGCGCAAT GCATGACATC ATTGCCAGCG ATACCTTCGA TAAAGTAAAA GCTGAAGCGC AGATCGCAAA AATGGAAGAA CAGCGCAAAG CTAACATGCT GGCGCACATG GAAACCCAGA ACAAAATTTA CAACATCCTG ACGCCGGAAC AGAAAAAGCA ATTTAATGCT AATTTTGAGA AGCGTCTGAC AGAACGTCCA GCGGCAAAAG GTAAAATGCC TGCAACTGCT GAATAA
|
Protein sequence | MRKLTALFVA STLALGAANL AHAADTTTAA PADAKPMMHH KGKFGPHQDM MFKDLNLTDA QKQQIREIMK GQRDQMKRPP LEERRAMHDI IASDTFDKVK AEAQIAKMEE QRKANMLAHM ETQNKIYNIL TPEQKKQFNA NFEKRLTERP AAKGKMPATA E
|
| |