Gene EcHS_A1800 details

Gene Information

• Locus tag: EcHS_A1800
• Symbol: thrS
• ID: 5595060
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 1817443
• End bp: 1819371
• Gene Length: 1929 bp
• Protein Length: 642 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640920947
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001458499
• Protein GI: 157161181
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000000000021107
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGTTA TAACTCTTCC TGATGGCAGC CAACGCCATT ACGACCACGC TGTAAGCCCC 
ATGGATGTTG CGCTGGACAT TGGTCCAGGT CTGGCGAAAG CCTGTATCGC AGGGCGCGTT 
AATGGCGAAC TGGTTGATGC TTGCGATCTG ATTGAAAACG ACGCACAACT GTCCATCATT 
ACCGCCAAAG ACGAAGACGG TCTGGAGATC ATTCGTCACT CCTGTGCGCA CCTGTTAGGG 
CACGCGATTA AACAACTTTG GCCGCATACC AAAATGGCAA TCGGCCCGGT TATTGACAAC 
GGTTTTTATT ACGACGTTGA TCTTGACCGC ACGTTAACCC AGGAAGATGT CGAAGCACTC 
GAGAAGCGGA TGCATGAGCT TGCTGAGAAA AACTACGACG TCATTAAGAA GAAAGTCAGC 
TGGCACGAAG CGCGTGAAAC TTTCGCCAAC CGTGGGGAGA GCTACAAAGT CTCCATTCTT 
GACGAAAACA TCGCCCATGA TGACAAGCCA GGTCTGTACT TCCATGAAGA ATATGTCGAT 
ATGTGCCGCG GTCCGCACGT ACCGAACATG CGTTTCTGCC ATCATTTCAA ACTAATGAAA 
ACGGCAGGGG CTTACTGGCG TGGCGACAGC AACAACAAAA TGTTGCAACG TATTTACGGT 
ACGGCGTGGG CAGACAAAAA AGCACTTAAC GCTTACCTGC AGCGCCTGGA AGAAGCCGCG 
AAACGCGACC ACCGTAAAAT CGGTAAACAG CTCGACCTGT ACCATATGCA GGAAGAAGCG 
CCGGGTATGG TATTCTGGCA CAACGACGGC TGGACCATCT TCCGTGAACT GGAAGTGTTT 
GTTCGTTCTA AACTGAAAGA GTACCAGTAT CAGGAAGTTA AAGGTCCGTT CATGATGGAC 
CGTGTCCTGT GGGAAAAAAC CGGTCACTGG GACAACTACA AAGATGCAAT GTTCACCACG 
TCTTCTGAGA ACCGTGAATA CTGCATTAAG CCGATGAACT GCCCGGGTCA CGTACAAATT 
TTTAACCAGG GGCTGAAGTC TTATCGCGAT CTGCCGCTGC GTATGGCCGA GTTTGGTAGC 
TGCCACCGTA ACGAGCCGTC AGGTTCGCTG CATGGCCTGA TGCGCGTGCG TGGATTTACC 
CAGGATGACG CGCATATCTT CTGTACTGAA GAACAAATTC GCGATGAAGT TAACGGATGT 
ATCCGTTTAG TCTATGATAT GTACAGCACT TTTGGCTTCG AGAAGATCGT CGTCAAACTC 
TCCACTCGTC CTGAAAAACG TATTGGCAGC GACGAAATGT GGGATCGTGC TGAGGCGGAC 
CTGGCGGTTG CGCTGGAAGA AAACAACATC CCGTTTGAAT ATCAACTGGG TGAAGGCGCT 
TTCTACGGTC CGAAAATTGA ATTTACCCTG TATGACTGCC TCGATCGTGC ATGGCAGTGC 
GGTACAGTAC AGCTGGACTT CTCCTTGCCG TCTCGTCTGA GCGCCTCCTA TGTGGGCGAA 
GACAACGAGC GTAAGGTACC GGTAATGATT CACCGCGCAA TTCTTGGGTC GATGGAACGT 
TTCATCGGTA TCCTGACCGA AGAATTCGCT GGTTTCTTCC CGACCTGGCT TGCGCCGGTT 
CAGGTTGTTA TCATGAATAT TACCGATTCA CAGTCTGATT ACGTTAACGA ATTGACGCAA 
AAACTATCAA ATGCGGGCAT TCGTGTTAAA GCAGACTTGA GAAATGAGAA GATTGGCTTT 
AAAATCCGCG AGCACACTTT GCGTCGCGTC CCATATATGC TGGTCTGTGG TGATAAAGAG 
GTGGAATCTG GCAAAGTTGC CGTTCGCACC CGCCGTGGTA AAGACCTGGG AAGCATGGAC 
GTAAATGAAG TGATCGAGAA GCTGCAACAA GAGATTCGCA GCCGCAGTCT TAAACAATTG 
GAGGAATAA 

 

Protein sequence

MPVITLPDGS QRHYDHAVSP MDVALDIGPG LAKACIAGRV NGELVDACDL IENDAQLSII 
TAKDEDGLEI IRHSCAHLLG HAIKQLWPHT KMAIGPVIDN GFYYDVDLDR TLTQEDVEAL 
EKRMHELAEK NYDVIKKKVS WHEARETFAN RGESYKVSIL DENIAHDDKP GLYFHEEYVD 
MCRGPHVPNM RFCHHFKLMK TAGAYWRGDS NNKMLQRIYG TAWADKKALN AYLQRLEEAA 
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WTIFRELEVF VRSKLKEYQY QEVKGPFMMD 
RVLWEKTGHW DNYKDAMFTT SSENREYCIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGS 
CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE EQIRDEVNGC IRLVYDMYST FGFEKIVVKL 
STRPEKRIGS DEMWDRAEAD LAVALEENNI PFEYQLGEGA FYGPKIEFTL YDCLDRAWQC 
GTVQLDFSLP SRLSASYVGE DNERKVPVMI HRAILGSMER FIGILTEEFA GFFPTWLAPV 
QVVIMNITDS QSDYVNELTQ KLSNAGIRVK ADLRNEKIGF KIREHTLRRV PYMLVCGDKE 
VESGKVAVRT RRGKDLGSMD VNEVIEKLQQ EIRSRSLKQL EE