Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1788 |
Symbol | |
ID | 5591656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1809068 |
End bp | 1809532 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640920935 |
Product | NlpC/P60 family lipoprotein |
Protein accession | YP_001458487 |
Protein GI | 157161169 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTCT GCCTTATTTT GATCACAGCA CTGTTTCTGG TCGGGTGTAG CCACCATAAA GCACCGCCGC CAAATGCCAG ACTTTCTGAT TCGATTACCG TTATTGCCGG TTTGAACGAC CAGCTACAAA GCTGGCATGG CACGCCGTAT CGTTATGGTG GCATGACGCG GCGCGGTGTG GACTGTTCGG GATTTGTGGT TGTAACGATG CGCGATCGTT TCGATTTGCA GCTGCCCCGA GAAACCAAAG AACAAGCCTC TATCGGCACG CAAATTGATA AAGACGAGTT GCTGCCTGGT GACCTGGTCT TTTTCAAAAC GGGGTCCGGA CAAAATGGTT TGCATGTAGG TATTTACGAT ACCAACAACC AATTTATCCA CGCCTCTACC AGCAAGGGAG TGATGCGTTC CTCACTTGAT AATGTCTATT GGCAGAAAAA TTTCTGGCAG GCGAGACGAA TCTAG
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Protein sequence | MRFCLILITA LFLVGCSHHK APPPNARLSD SITVIAGLND QLQSWHGTPY RYGGMTRRGV DCSGFVVVTM RDRFDLQLPR ETKEQASIGT QIDKDELLPG DLVFFKTGSG QNGLHVGIYD TNNQFIHAST SKGVMRSSLD NVYWQKNFWQ ARRI
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