Gene EcHS_A1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1772 
Symbol 
ID5595049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1794530 
End bp1795801 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content45% 
IMG OID640920922 
Productmajor facilitator transporter 
Protein accessionYP_001458474 
Protein GI157161156 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATGT CTCAAAATAA GGCTTTCAGC ACGCCATTTA TCCTGGCTGT TCTTTGTATT 
TACTTCAGCT ACTTCCTGCA CGGCATTAGT GTTATTACGC TTGCCCAAAA TATGTCATCT
CTGGCGGAAA AGTTTTCCAC TGACAACGCG GGCATTGCCT ACTTAATTTC CGGTATCGGT
TTGGGGCGAT TGATCAGTAT TTTATTCTTC GGTGTGATCT CCGATAAGTT TGGTCGTCGG
GCGGTGATAT TAATGGCAGT AATAATGTAT CTGCTATTCT TCTTTGGTAT TCCCGCTTGC
CCGAATTTAA CTCTCGCCTA CGGTCTGGCA GTGTGCGTAG GTATCGCTAA CTCAGCGCTG
GATACGGGTG GCTACCCCGC GCTCATGGAA TGCTTTCCGA AAGCCTCTGG TTCGGCGGTC
ATACTGGTTA AAGCGATGGT GTCATTTGGG CAAATGTTCT ACCCAATGCT GGTGAGCTAT
ATGTTGCTCA ATAATATCTG GTACGGCTAT GGGCTGATTA TTCCGGGTAT TCTATTTGTA
CTGATCACGC TGATGCTGTT GAAAAGCAAA TTCCCCAGCC AGTTGGTGGA CGCCAGCGTA
ACTAATGAAT TACCGCAAAT GAACAGCAAA CCGTTAGTCT GGCTGGAAGG TGTTTCATCG
GTACTGTTCG GTGTAGCCGC ATTCTCGACC TTTTATGTGA TTGTGGTGTG GATGCCCAAA
TATGCGATGG CTTTTGCTGG TATGTCAGAA GCTGAGGCAT TAAAAACCAT CTCTTATTAC
AGTATGGGCT CGTTGGTCTG TGTCTTTATT TTTGCCGCAC TACTGAAAAA AATGGTCCGG
CCCATCTGGG CTAATGTATT TAACTCTGCA CTGGCAACAA TAACAGCAGC CATTATCTAC
CTGTACCCTT CTCCACTGGT GTGTAATGCC GGCGCCTTTG TTATCGGTTT CTCAGCAGCT
GGCGGCATTT TACAGCTCGG TGTTTCGGTC ATGTCAGAGT TTTTCCCAAA AAGCAAAGCC
AAAGTCACCA GTATTTATAT GATGATGGGT GGACTGGCTA ACTTTGTTAT TCCGCTGATT
ACCGGTTATC TGTCGAACAT CGGCCTGCAA TATATCATTG TTCTCGATTT TACTTTCGCG
CTGCTGGCCC TGATTACCGC AATTATTGTT TTTATCCGCT ATTACCGCGT TTTTATTATT
CCTGAGAATG ATGTGCGGTT TGGCGAGCGC AAATTTAGCA CCCGGTTAAA CACAATTAAG
CATAGAGGTT AA
 
Protein sequence
MKMSQNKAFS TPFILAVLCI YFSYFLHGIS VITLAQNMSS LAEKFSTDNA GIAYLISGIG 
LGRLISILFF GVISDKFGRR AVILMAVIMY LLFFFGIPAC PNLTLAYGLA VCVGIANSAL
DTGGYPALME CFPKASGSAV ILVKAMVSFG QMFYPMLVSY MLLNNIWYGY GLIIPGILFV
LITLMLLKSK FPSQLVDASV TNELPQMNSK PLVWLEGVSS VLFGVAAFST FYVIVVWMPK
YAMAFAGMSE AEALKTISYY SMGSLVCVFI FAALLKKMVR PIWANVFNSA LATITAAIIY
LYPSPLVCNA GAFVIGFSAA GGILQLGVSV MSEFFPKSKA KVTSIYMMMG GLANFVIPLI
TGYLSNIGLQ YIIVLDFTFA LLALITAIIV FIRYYRVFII PENDVRFGER KFSTRLNTIK
HRG