Gene EcHS_A1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1736 
Symbol 
ID5592401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1758145 
End bp1759314 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content54% 
IMG OID640920884 
Productmajor facilitator transporter 
Protein accessionYP_001458440 
Protein GI157161122 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00000269291 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA ACTATCCGTT GCTGGCGCTG GCGATTGGCG CGTTTGGTAT CGGGACAACG 
GAGTTCTCGC CAATGGGCTT GTTGCCCGTC ATTGCGCGCG GTGTGGATGT CTCGATTCCC
GCTGCCGGAA TGTTAATCAG TGCCTATGCA GTTGGCGTAA TGGTGGGCGC GCCGCTGATG
ACGCTTCTAC TTTCTCATCG TGCCCGCCGC AGTGCGTTGA TTTTCCTGAT GGCAATTTTC
ACGCTAGGCA ACGTTCTTTC CGCCATCGCG CCGGATTATA TGACCCTGAT GCTTTCACGC
ATTTTGACCA GCCTGAATCA CGGAGCATTT TTTGGTTTGG GTTCAGTCGT GGCCGCAAGC
GTGGTGCCAA AACATAAACA GGCCAGCGCA GTTGCCACTA TGTTTATGGG GTTAACCCTG
GCAAATATCG GTGGCGTGCC GGCGGCGACC TGGTTGGGTG AAACCATCGG CTGGCGGATG
TCATTTCTGG CAACGGCGGG GCTGGGAGTG ATTTCAATGG TAAGTCTGTT CTTCTCATTA
CCTAAAGGTG GTGCAGGGGC ACGACCTGAA GTGAAAAAAG AGCTGGCGGT ATTAATGCGT
CCGCAGGTGC TGTCTGCATT GCTGACGACG GTACTGGGAG CTGGTGCAAT GTTTACTCTC
TACACCTATA TCTCTCCGGT ACTGCAAAGT ATTACCCACG CAACACCGGT GTTCGTCACG
GCAATGCTGG TGCTGATTGG TGTCGGATTC TCTATCGGTA ACTATCTCGG CGGCAAACTG
GCAGATCGTT CAGTTAACGG CACGTTGAAA GGCTTTTTGT TGCTGCTGAT GGTGATTATG
CTGGCAATCC CGTTCCTGGC CCGCAATGAG TTCGGCGCAG CTATTAGCAT GGTGGTGTGG
GGCGCAGCAA CCTTTGCGGT CGTACCGCCG TTACAGATGC GCGTGATGCG TGTCGCCAGT
GAAGCGCCGG GTCTGTCTTC ATCAGTCAAT ATTGGTGCCT TTAATCTTGG AAATGCGCTG
GGAGCAGCTG CTGGTGGTGC GGTAATTTCC GCTGGGCTGG GATACAGCTT TGTGCCGGTG
ATGGGAGCGA TTGTCGCGGG ACTGGCATTA TTGCTGGTGT TTATGTCAGC CAGAAAACAA
CCTGAAACAG TTTGCGTTGC TAACAGCTAA
 
Protein sequence
MKINYPLLAL AIGAFGIGTT EFSPMGLLPV IARGVDVSIP AAGMLISAYA VGVMVGAPLM 
TLLLSHRARR SALIFLMAIF TLGNVLSAIA PDYMTLMLSR ILTSLNHGAF FGLGSVVAAS
VVPKHKQASA VATMFMGLTL ANIGGVPAAT WLGETIGWRM SFLATAGLGV ISMVSLFFSL
PKGGAGARPE VKKELAVLMR PQVLSALLTT VLGAGAMFTL YTYISPVLQS ITHATPVFVT
AMLVLIGVGF SIGNYLGGKL ADRSVNGTLK GFLLLLMVIM LAIPFLARNE FGAAISMVVW
GAATFAVVPP LQMRVMRVAS EAPGLSSSVN IGAFNLGNAL GAAAGGAVIS AGLGYSFVPV
MGAIVAGLAL LLVFMSARKQ PETVCVANS