Gene EcHS_A1729 details

Gene Information

• Locus tag: EcHS_A1729
• Symbol: rnt
• ID: 5590949
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1750298
• End bp: 1750945
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640920877
• Product: ribonuclease T
• Protein accession: YP_001458433
• Protein GI: 157161115
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
• TIGRFAM ID: [TIGR01298] ribonuclease T

Plasmid Coverage information

• Num covering plasmid clones: 60
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGATA ACGCTCAACT TACCGGTCTG TGCGACCGTT TTCGTGGTTT TTATCCTGTT 
GTGATCGATG TTGAAACAGC CGGATTTAAC GCCAAAACCG ATGCGCTGCT TGAGATTGCC 
GCCATCACCC TGAAAATGGA TGAACAAGGC TGGCTGATGC CGGACACCAC ATTACATTTC 
CACGTCGAAC CATTTGTCGG CGCAAATTTG CAACCAGAAG CCCTCGCCTT CAACGGCATT 
GACCCGAACG ATCCCGATCG CGGCGCGGTC AGCGAATACG AGGCGCTGCA CGAAATTTTT 
AAAGTTGTAC GCAAAGGTAT TAAAGCGAGC GGCTGTAACC GCGCCATTAT GGTGGCGCAC 
AATGCCAATT TTGATCACAG CTTTATGATG GCCGCCGCAG AACGCGCCTC ACTGAAACGT 
AACCCGTTCC ACCCTTTCGC CACTTTTGAC ACTGCTGCAC TGGCCGGGCT GGCACTCGGA 
CAAACCGTAT TGTCAAAGGC TTGCCAGACC GCTGGCATGG ACTTCGACAG CACCCAGGCG 
CACTCCGCGC TGTACGACAC CGAACGCACT GCTGTGCTGT TTTGTGAAAT CGTCAACCGC 
TGGAAACGTC TGGGAGGCTG GCCGCTACCT GCCGCCGAAG AGGTGTAA 

 

Protein sequence

MSDNAQLTGL CDRFRGFYPV VIDVETAGFN AKTDALLEIA AITLKMDEQG WLMPDTTLHF 
HVEPFVGANL QPEALAFNGI DPNDPDRGAV SEYEALHEIF KVVRKGIKAS GCNRAIMVAH 
NANFDHSFMM AAAERASLKR NPFHPFATFD TAALAGLALG QTVLSKACQT AGMDFDSTQA 
HSALYDTERT AVLFCEIVNR WKRLGGWPLP AAEEV