| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1687 |
|---|
| Symbol | fumA |
|---|
| ID | 5591274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1708865 |
|---|
| End bp | 1710511 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640920835 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_001458391 |
|---|
| Protein GI | 157161073 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
|---|
| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 0.713112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAACA AACCCTTTCA TTATCAGGCT CCTTTTCCAC TCAAAAAAGA TGATACTGAG
TATTACCTGC TAACCAGCGA ACACGTTAGC GTATCTGAAT TTGAAGGGCA GGAGATTTTG
AAAGTCGCAC CCGAAGCGTT AACTCTGTTG GCGCGTCAGG CGTTTCATGA TGCGTCGTTT
ATGCTGCGTC CGGCTCACCA ACAACAGGTG GCCGACATTC TGCGTGACCC GGAGGCCAGC
GAAAATGATA AATATGTGGC GCTGCAATTC CTGCGTAACT CCGACATCGC GGCGAAAGGC
GTTCTGCCAA CCTGTCAGGA TACCGGCACT GCGATTATTG TTGGTAAAAA AGGGCAGCGT
GTATGGACCG GTGGCTGTGA TGAAGCGGCG CTGGCGCGCG GTGTCTATAA CACTTATATC
GAAGATAATT TGCGCTACTC GCAAAACGCG CCGCTGGATA TGTATAAAGA GGTGAATACC
GGCACCAATC TGCCAGCGCA GATCGATCTT TATGCCGTTG ATGGCGACGA GTACAAATTC
CTCTGTATCG CCAAAGGTGG TGGTTCGGCA AACAAGACGT ATCTCTATCA GGAAACCAAA
GCGTTACTAA CGCCGGGGAA ACTGAAAAAT TACCTGGTTG AGAAGATGCG CACGCTGGGT
ACGGCGGCCT GTCCTCCGTA TCATATTGCG TTCGTAATTG GTGGAACTTC TGCAGAAACT
AACCTTAAAA CAGTGAAACT GGCTTCCGCT AAATACTATG ACGAACTGCC AACGGAAGGG
AATGAGCACG GTCAGGCATT CCGCGATGTG GAACTGGAAA AAGAATTGCT GATCGAAGCG
CAAAATCTCG GTCTGGGTGC GCAGTTTGGT GGTAAATACT TCGCTCACGA CATACGCGTG
ATTCGCCTGC CACGTCACGG CGCATCCTGT CCGGTTGGTA TGGGTGTTTC CTGCTCTGCT
GACCGTAATA TCAAAGCGAA GATCAACCGT CAGGGGATCT GGATCGAAAA ACTGGAACAT
AATCCAGGTA AATATATCCC TGAAGAGCTG CGTAAAGCGG GAGAAGGCGA AGCGGTGCGC
GTTGACCTTA ACCGTCCGAT GAAAGAGATC CTCGCACAGT TGTCGCAGTA TCCCGTTTCT
ACACGCTTAT CGCTTAACGG CACGATTATC GTCGGTCGTG ATATTGCTCA CGCCAAACTG
AAAGAGCGGA TGGATAACGG TGAAGGGCTG CCGCAGTACA TTAAAGATCA TCCGATTTAC
TACGCGGGTC CGGCCAAAAC GCCGGAAGGT TATGCCTCCG GTTCTCTTGG CCCAACGACC
GCCGGACGGA TGGATTCTTA TGTCGATCAA CTGCAAGCGC AGGGCGGAAG TATGATCATG
CTGGCGAAAG GCAACCGCAG CCAGCAGGTG ACGGATGCCT GTAAAAAACA CGGCGGCTTC
TACCTTGGCA GTATCGGTGG TCCGGCCGCT GTATTGGCGC AGGGAAGTAT TAAGAGCCTG
GAATGTGTTG AATATCCGGA ACTGGGAATG GAAGCCATCT GGAAAATTGA AGTGGAAGAT
TTCCCGGCGT TTATCCTTGT GGATGATAAA GGAAATGACT TCTTCCAGCA GATACAACTC
ACACAGTGCA CTCGCTGTGT GAAATAA
|
|---|
| Protein sequence | MSNKPFHYQA PFPLKKDDTE YYLLTSEHVS VSEFEGQEIL KVAPEALTLL ARQAFHDASF
MLRPAHQQQV ADILRDPEAS ENDKYVALQF LRNSDIAAKG VLPTCQDTGT AIIVGKKGQR
VWTGGCDEAA LARGVYNTYI EDNLRYSQNA PLDMYKEVNT GTNLPAQIDL YAVDGDEYKF
LCIAKGGGSA NKTYLYQETK ALLTPGKLKN YLVEKMRTLG TAACPPYHIA FVIGGTSAET
NLKTVKLASA KYYDELPTEG NEHGQAFRDV ELEKELLIEA QNLGLGAQFG GKYFAHDIRV
IRLPRHGASC PVGMGVSCSA DRNIKAKINR QGIWIEKLEH NPGKYIPEEL RKAGEGEAVR
VDLNRPMKEI LAQLSQYPVS TRLSLNGTII VGRDIAHAKL KERMDNGEGL PQYIKDHPIY
YAGPAKTPEG YASGSLGPTT AGRMDSYVDQ LQAQGGSMIM LAKGNRSQQV TDACKKHGGF
YLGSIGGPAA VLAQGSIKSL ECVEYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIQL
TQCTRCVK
|
|---|
| |