| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1686 |
|---|
| Symbol | fumC |
|---|
| ID | 5591273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1707319 |
|---|
| End bp | 1708722 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640920834 |
|---|
| Product | fumarate hydratase |
|---|
| Protein accession | YP_001458390 |
|---|
| Protein GI | 157161072 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0114] Fumarase |
|---|
| TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 0.569967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAG TACGCAGCGA AAAAGATTCG ATGGGGGCGA TTGATGTCCC GGCAGATAAG
CTGTGGGGCG CACAAACTCA ACGCTCGCTG GAGCATTTCC GCATTTCGAC GGAGAAAATG
CCCACCTCAC TGATTCATGC GCTGGCGCTA ACCAAGCGCG CAGCGGCAAA AGTTAATGAA
GATTTAGGCT TGTTGTCTGA AGAGAAAGCG AGCGCCATTC GGCAGGCGGC GGATGAAGTA
CTGGCAGGAC AGCATGACGA CGAATTCCCG CTGGCTATCT GGCAGACCGG CTCCGGCACG
CAAAGTAACA TGAACATGAA CGAAGTGCTG GCTAACCGGG CCAGTGAATT ACTCGGCGGC
GTGCGCGGGA TGGAACGTAA AGTTCACCCT AACGACGACG TGAACAAAAG CCAAAGTTCC
AACGATGTCT TTCCGACGGC GATGCACGTT GCGGCGCTGC TGGCGCTGCG CAAGCAACTC
ATTCCGCAGC TTAAAACCCT GACACAGACG CTGAGTGAAA AATCGCGTGC ATTTGCCGAT
ATCGTCAAAA TCGGTCGAAC CCACTTGCAG GACGCCACGC CGCTAACACT GGGGCAGGAG
ATTTCCGGCT GGGTAGCGAT GCTCGAGTAT AATCTCAAAC ATATCGAATA CAGCCTGCCT
CACGTAGCGG AACTGGCTCT TGGCGGTACA GCGGTGGGTA CTGGACTAAA TACCCATCCG
GAGTATGCGC GTCGCGTAGC AGATGAACTG GCAGTCATTA CCTGTGCACC GTTTGTTACC
GCGCCGAACA AATTTGAAGC GCTGGCGACC TGTGATGCTC TGGTTCAGGC GCACGGCGCG
TTGAAAGGGT TGGCTGCGTC ACTGATGAAA ATCGCCAATG ATGTCCGCTG GCTGGCCTCT
GGCCCGCGCT GCGGAATTGG TGAAATCTCA ATCCCGGAAA ATGAGCCGGG CAGCTCAATC
ATGCCGGGGA AAGTGAATCC AACACAGTGT GAGGCATTAA CCATGCTCTG CTGTCAGGTG
ATGGGGAACG ACGTGGCGAT CAACATGGGG GGCGCTTCCG GTAACTTTGA ACTGAACGTC
TTCCGTCCAA TGGTGATCCA CAATTTCCTG CAATCGGTGC GCTTGCTGGC AGATGGCATG
GAAAGTTTTA ACAAACACTG CGCAGTGGGT ATTGAACCGA ATCGTGAGCG AATCAATCAA
TTACTCAATG AATCGCTGAT GCTGGTGACT GCGCTTAACA CCCACATTGG TTATGACAAA
GCCGCGGAGA TCGCCAAAAA AGCGCATAAA GAAGGGCTGA CCTTAAAAGC TGCGGCCCTT
GGGCTGGGGT ATCTTAGCGA AGCCGAGTTT GACAGCTGGG TACGGCCAGA ACAGATGGTC
GGCAGTATGA AAGCCGGGCG TTAA
|
|---|
| Protein sequence | MNTVRSEKDS MGAIDVPADK LWGAQTQRSL EHFRISTEKM PTSLIHALAL TKRAAAKVNE
DLGLLSEEKA SAIRQAADEV LAGQHDDEFP LAIWQTGSGT QSNMNMNEVL ANRASELLGG
VRGMERKVHP NDDVNKSQSS NDVFPTAMHV AALLALRKQL IPQLKTLTQT LSEKSRAFAD
IVKIGRTHLQ DATPLTLGQE ISGWVAMLEY NLKHIEYSLP HVAELALGGT AVGTGLNTHP
EYARRVADEL AVITCAPFVT APNKFEALAT CDALVQAHGA LKGLAASLMK IANDVRWLAS
GPRCGIGEIS IPENEPGSSI MPGKVNPTQC EALTMLCCQV MGNDVAINMG GASGNFELNV
FRPMVIHNFL QSVRLLADGM ESFNKHCAVG IEPNRERINQ LLNESLMLVT ALNTHIGYDK
AAEIAKKAHK EGLTLKAAAL GLGYLSEAEF DSWVRPEQMV GSMKAGR
|
|---|
| |