Gene EcHS_A1653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1653 
Symbol 
ID5594636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1675184 
End bp1676050 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content47% 
IMG OID640920801 
Productstarvation sensing protein RspB 
Protein accessionYP_001458357 
Protein GI157161039 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.00258422 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCA TATTAATTGA AAAACCGAAT CAACTGGCGA TTGTCGAACG TGAAATACCC 
ACCCCGTCAG CGGGTGAAGT ACGAGTAAAA GTGAAACTTG CCGGAATTTG TGGTTCAGAT
AGCCATATTT ATCGTGGGCA TAATCCTTTT GCGAAATATC CGCGCGTCAT TGGTCATGAA
TTCTTTGGCG TCATTGATGC AGTGGGTGAA GGCGTGGAAA GCGCCAGAGT CGGTGAACGT
GTTGCTGTCG ATCCGGTGGT CAGCTGTGGG CATTGCTATC CGTGCTCTGT AGGTAAACCG
AACGTTTGTA CGACACTGGC TGTATTAGGT GTGCACGCTG ACGGTGGTTT CAGTGAATAT
GCCGTGGTTC CGGCAAAAAA TGCGTGGAAA ATTCCTGAAG CAGTGGCCGA TCAATATGCG
GTAATGATCG AACCTTTTAC CATTGCGGCT AACGTAACCG GACATGGTCA ACCGACTGAA
AATGATACCG TTCTGGTTTA TGGTGCCGGT CCAATCGGCC TGACGATCGT TCAGGTATTA
AAAGGCGTCT ATAACGTTAA AAATGTGATT GTTGCCGATC GCATTGATGA ACGACTGGAA
AAAGCGAAAG AGAGCGGGGC TGACTGGGCG ATTAATAACA GCCAGACACC GCTTGGCGAG
ATTTTCACTG AAAAAGGCAT CAAGCCGACA TTAATTATTG ATGCGGCTTG TCATCCTTCT
ATCCTGAAAG AGGCCGTAAC GCTGGCTTCT CCAGCGGCAC GTATTGTATT GATGGGTTTC
TCCAGTGAAC CGTCTGAAGT GATTCAGCAA GGAATTACCG GAAAAGAACT CTCTATTTTC
GGTGATGCTG CCAACTTACT GATTTAG
 
Protein sequence
MKSILIEKPN QLAIVEREIP TPSAGEVRVK VKLAGICGSD SHIYRGHNPF AKYPRVIGHE 
FFGVIDAVGE GVESARVGER VAVDPVVSCG HCYPCSVGKP NVCTTLAVLG VHADGGFSEY
AVVPAKNAWK IPEAVADQYA VMIEPFTIAA NVTGHGQPTE NDTVLVYGAG PIGLTIVQVL
KGVYNVKNVI VADRIDERLE KAKESGADWA INNSQTPLGE IFTEKGIKPT LIIDAACHPS
ILKEAVTLAS PAARIVLMGF SSEPSEVIQQ GITGKELSIF GDAANLLI