Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1625 |
Symbol | |
ID | 5592612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1646027 |
End bp | 1646917 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640920773 |
Product | hypothetical protein |
Protein accession | YP_001458329 |
Protein GI | 157161011 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0000118322 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGA AGACAACGGA AATTGATGCC ATCTTGTTAA ATCTCAATAA GGCTATCGAT GCCCACTACC AGTGGCTGGT GAGTATGTTT CACAGCGTGG TCGCGAGAGA TGCCAGTAAG CCAGAAATAA CGGATAACCA TTCTTATGGA CTGTGCCAGT TTGGTCGGTG GATTGATCAT CTGGGGCCAC TCGATAACGA TGAATTACCT TACGTTCGGC TAATGGATTC TGCCCATCAA CATATGCATA ACTGTGGTCG GGAATTAATG CTGGCTATTG TTGAAAATCA CTGGCAGGAC GCGCATTTCG ACACCTTTCA GGAGGGGTTG TTTTCTTTTA CTGCGGCATT AACCGATTAC AAAATTTATT TGCTGACGAT CCGTAGCAAT ATGGATGTTT TGACGGGATT GCCGGGGCGT CGGGTTCTTG ATGAATCCTT TGATCATCAG TTACGCAACG CTGAGCCTCT GAATCTTTAT TTAATGTTGT TGGATATTGA CCGATTTAAA TTGGTTAATG ATACCTACGG GCATTTAATC GGCGATGTAG TATTACGCAC CCTGGCAACT TACTTAGCCA GTTGGACGCG TGATTACGAA ACGGTTTATC GCTACGGGGG CGAAGAATTT ATCATTATTG TCAAAGCGGC TAATGATGAA GAAGCATGTC GTGCAGGTGT CAGAATTTGC CAGTTAGTCG ATAACCATGC CATCACACAT TCTGAAGGGC ATAACAACAT TACCGTGACA GCAGGTGTCA GTCGCGCATT TCCTGAAGAG CCTCTGGATG TGGTCATTGG AAGAGCAGAC CGGGCAATGT ATGAGGGTAA GCAAACCGGA AGAAACCGCT GCATGTTTAT TGACGAACAA AATGTGATTA ACCGAGTTTA A
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Protein sequence | MIKKTTEIDA ILLNLNKAID AHYQWLVSMF HSVVARDASK PEITDNHSYG LCQFGRWIDH LGPLDNDELP YVRLMDSAHQ HMHNCGRELM LAIVENHWQD AHFDTFQEGL FSFTAALTDY KIYLLTIRSN MDVLTGLPGR RVLDESFDHQ LRNAEPLNLY LMLLDIDRFK LVNDTYGHLI GDVVLRTLAT YLASWTRDYE TVYRYGGEEF IIIVKAANDE EACRAGVRIC QLVDNHAITH SEGHNNITVT AGVSRAFPEE PLDVVIGRAD RAMYEGKQTG RNRCMFIDEQ NVINRV
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