Gene EcHS_A1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1620 
Symbol 
ID5591845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1642053 
End bp1642364 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content42% 
IMG OID640920768 
ProductPTS system lactose/cellobiose family IIB subunit 
Protein accessionYP_001458324 
Protein GI157161006 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1440] Phosphotransferase system cellobiose-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.0607362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TATTGTTAGT TTGCGCTGCG GGCATGTCAA CCAGTATGCT GGTTAAACGT 
ATGATTGATC ATGCTAACGC TATTTCACTT GAAGTTAATA TTTCCGCATT GGCGATTGCA
GAGGCTAAAG GAAAAATTAA AAATAACGAA GTTGACGTTG TTTTACTTGG CCCGCAAGTT
CGCTTTCAGA AACCGGAGAT TGAAGCCGTT GCACAGGGGA AAATGCCTGT AGCCATTATC
GAGATGAAAG ACTACGGCAC CATGAACGGA CAGGCAGTTC TTGAATTTGC GATGAAACTA
CTGCAACAGT AA
 
Protein sequence
MKKILLVCAA GMSTSMLVKR MIDHANAISL EVNISALAIA EAKGKIKNNE VDVVLLGPQV 
RFQKPEIEAV AQGKMPVAII EMKDYGTMNG QAVLEFAMKL LQQ