Gene EcHS_A1618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1618 
Symbol 
ID5593528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1640277 
End bp1640588 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content44% 
IMG OID640920766 
ProductPTS system lactose/cellobiose-specific family IIA subunit 
Protein accessionYP_001458322 
Protein GI157161004 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1447] Phosphotransferase system cellobiose-specific component IIA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCAG ATGAAGAACT TGTTATGGAG TTACTGGTCA ACGCGGGGCA GGCACGTTCT 
GACGCGATGG AAGCCATACG TTGTGCCGGG CAAAAAGACT GGCAGGGCGC AACTCAGCTA
ATGGCCAGTT CTGAATCTGC CTGTCTTCAG GCACATAAGA TTCAGACCGC ATTAATTAGT
CAGGATGAAG GCTGTGGCAA AATAAAAGTT AATTTAATTC TGGTTCATGC ACAGGATCAT
TTGATGAATG CAATATTATG CCAGGATTTA GCCAGGGAAA TTATTTCATT AAGAAAAGAA
CTCCATGCCT GA
 
Protein sequence
MFADEELVME LLVNAGQARS DAMEAIRCAG QKDWQGATQL MASSESACLQ AHKIQTALIS 
QDEGCGKIKV NLILVHAQDH LMNAILCQDL AREIISLRKE LHA