Gene EcHS_A1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1603 
SymboluxaB 
ID5591391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1626051 
End bp1627502 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content52% 
IMG OID640920755 
Productaltronate oxidoreductase 
Protein accessionYP_001458311 
Protein GI157160993 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.408494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACAC TAAATCGTCG CGATTTTCCC GGTGCACAGT ATCCAGAACG TATCATTCAG 
TTTGGTGAAG GTAACTTCCT GCGCGCCTTT GTTGACTGGC AAATCGATCT CCTGAATGAG
CACACCGATC TGAATTCTGG CGTGGTCGTT GTTCGTCCGA TTGAAACTTC ATTCCCGCCG
TCACTGAGCA CGCAGGATGG TCTGTACACC ACCATTATCC GTGGCCTGAA TGAGAAGGGG
GAAGCGGTCA GCGACGCGCG TCTGATTCGC TCGGTTAATC GTGAAATCAG CGTCTACAGT
GAATACGATG AATTCCTGAA ACTGGCGCAC AACCCGGAAA TGCGCTTTGT TTTCTCTAAC
ACCACCGAAG CGGGTATCAG CTACCATGCG GGCGATAAAT TCGATGACGC GCCAGCGGTA
AGCTATCCGG CAAAACTGAC CCGTCTGCTG TTCGAACGCT TTAGCCATTT CAACGGTGCG
CTGGATAAAG GTTGGATCAT CATTCCGTGT GAGTTGATTG ACTACAATGG CGACGCGTTG
CGTGAACTGG TGCTGCGCTA TGCGCAAGAG TGGGCACTGC CAGAAGCATT TATTCAATGG
CTGGATCAGG CTAACAGCTT CTGTTCTACG CTGGTGGACC GTATCGTTAC CGGTTATCCG
CGCGATGAAG TGGCTAAACT GGAAGAAGAA CTGGGTTATC ACGATGGTTT TCTCGACACC
GCTGAACACT TTTACCTGTT TGTGATTCAG GGACCGAAAT CCTTAGCGAC TGAACTGCGT
CTGGACAAAT ATCCGCTCAA CGTGCTGATT GTTGACGATA TTAAACCGTA CAAAGAACGC
AAAGTGGCAA TCCTCAACGG TGCGCACACC GCGCTGGTGC CGGTGGCGTT CCAGGCAGGG
CTGGATACCG TAGGTGAAGC GATGAACGAT GCTGAAATTT GCGCATTCGT TGAAAAAGCT
ATCTACGAAG AAATTATTCC GGTACTGGAT TTGCCTCGTG ATGAACTGGA ATCTTTCGCC
AGTGCAGTCA CCGGGCGTTT CCGTAACCCG TACATTAAGC ATCAGCTGCT GTCTATCGCG
CTCAACGGTA TGACCAAGTT CCGCACTCGC ATCCTGCCGC AGCTGCTGGC AGGGCAGAAG
GCAAAAGGCA CACTTCCGGC GCGCCTTACT TTCGCATTAG CGGCATTGAT TGCCTTCTAT
CGCGGTGAGC GTAACGGAGA AACATATCCG GTACAGGACG ATGCACACTG GCTGGAACGT
TATCAGCAAC TCTGGAGCCA GCATCGTGAC CGTGTTATCG GCACCCAGGA ACTGGTAGCG
ATTGTTTTGG CAGAAAAAGA CCACTGGGAG CAGGACCTGA CGCAAGTGCC TGGTCTGGTC
GAGCAGGTTG CTAATGACCT GGATGCGATT CTTGAAAAAG GGATGCGCGA AGCTGTACGT
CCGTTGTGCT AA
 
Protein sequence
MKTLNRRDFP GAQYPERIIQ FGEGNFLRAF VDWQIDLLNE HTDLNSGVVV VRPIETSFPP 
SLSTQDGLYT TIIRGLNEKG EAVSDARLIR SVNREISVYS EYDEFLKLAH NPEMRFVFSN
TTEAGISYHA GDKFDDAPAV SYPAKLTRLL FERFSHFNGA LDKGWIIIPC ELIDYNGDAL
RELVLRYAQE WALPEAFIQW LDQANSFCST LVDRIVTGYP RDEVAKLEEE LGYHDGFLDT
AEHFYLFVIQ GPKSLATELR LDKYPLNVLI VDDIKPYKER KVAILNGAHT ALVPVAFQAG
LDTVGEAMND AEICAFVEKA IYEEIIPVLD LPRDELESFA SAVTGRFRNP YIKHQLLSIA
LNGMTKFRTR ILPQLLAGQK AKGTLPARLT FALAALIAFY RGERNGETYP VQDDAHWLER
YQQLWSQHRD RVIGTQELVA IVLAEKDHWE QDLTQVPGLV EQVANDLDAI LEKGMREAVR
PLC