| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1600 |
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| Symbol | lsrG |
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| ID | 5591618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1623821 |
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| End bp | 1624111 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640920752 |
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| Product | autoinducer-2 (AI-2) modifying protein LsrG |
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| Protein accession | YP_001458308 |
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| Protein GI | 157160990 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1359] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 0.895383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACGTCA CACTGGTTGA AATTAACGTT CATGAAGACA AGGTTGACGA GTTTATCGAA
GTTTTTCGCC AGAACCACCT GGGCTCTGTA CAGGAAGAAG GCAATTTGCG CTTCGATGTC
TTACAGGACC CGGAAGTGAA TTCGCGCTTT TATATCTACG AAGCCTATAA AGATGAAGAC
GCAGTGGCGT TCCATAAAAC CACGCCCCAC TACAAAACCA GTGTCGCGAA ACTGGAATCT
TTAATGACCG GGCCGCGTAA AAAACGTCTG TTCAATGGTT TGATGCCGTG A
|
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| Protein sequence | MHVTLVEINV HEDKVDEFIE VFRQNHLGSV QEEGNLRFDV LQDPEVNSRF YIYEAYKDED
AVAFHKTTPH YKTSVAKLES LMTGPRKKRL FNGLMP
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