| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1595 |
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| Symbol | lsrA |
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| ID | 5594319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1618312 |
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| End bp | 1619847 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640920747 |
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| Product | autoinducer-2 ABC transporter, ATP-binding protein LsrA |
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| Protein accession | YP_001458303 |
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| Protein GI | 157160985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACGA GTGATACCCG CGCGTTACCG CTACTTTGCG CCCGCTCGGT TTATAAACAG
TATTCAGGGG TCAATGTCCT GAAAGGCATC GATTTTACGT TGCATCAGGG GGAGGTCCAC
GCCCTGCTCG GCGGCAATGG TGCCGGTAAA TCGACGTTAA TGAAGATTAT TGCCGGTATT
ACCCCTGCTG ATAGCGGTAC GCTGGAGATT GGGGGCAACA ACTACGCCAG ATTAACGCCA
GTTCATGCTC ATCAGCTGGG TATTTATCTC GTTCCCCAGG AACCGCTGCT TTTCTCAAGC
CTGTCGATAA AAGAAAACAT CCTGTTTGGG CTGGCAAAAA AACAGCTCTC CATGCAGAAA
ATGAAGAACT TGCTGGCGGC GCTGGGCTGC CAGTTTGATC TGCATAGTCT GGCAGGATCG
CTGGATGTCG CCGATCGCCA AATGGTGGAA ATCCTCCGCG GGCTGATGCG CGACTCGCGG
ATTCTGATCC TCGATGAACC TACCGCCTCG CTTACCCCTG CGGAAACCGA ACGCTTGTTT
ACTCGCTTGC AAGAGCTGCT TGCTACTGGC GTGGGTATTG TTTTTATCTC GCATAAGCTG
CCGGAAATTC GCCAGATTGC CGATCGAATT AGCGTGATGC GCGACGGAAC CATCGCCTTA
AGCGGCAAAA CCAGCGAACT GTCTACCGAC GACATTATTC AGGCCATCAC GCCAGTGGTA
CGGGAAAAAT CGCTCTCTGC CAGCCAAAAA TTATGGCTGG AGTTACCTGG TAACCGCCCA
CAACATGCCG CCGGAACGCC GGTGCTGACA CTGGAAAATC TGACTGGCGA AGGCTTCAGG
AATGTCAGCC TGACGCTCAA TGCCGGAGAA ATTCTGGGCC TGGCTGGGCT GGTGGGAGCC
GGACGCACAG AACTGGCCGA GACGCTCTAT GGTCTGCGTA CTTTGCGTGG CGGACGCATT
ATGCTGAATG GTAACGAGAT CAATAAATTA TCCACTGGAG AACGTTTACT GCGCGGTCTG
GTTTATCTGC CGGAAGATCG CCAGTCATCA GGACTGAATC TCGATGCTTC GCTGGCCTGG
AATGTCTGCG CCCTTACTCA TAACCTTCGT GGATTCTGGG CGAAAACCGC GAAAGATAAT
GCCACCCTGG AACGATATCG TCGGGCGCTG AATATTAAAT TTAACCAACC GGAACAAGCT
GCACGGACAT TATCCGGTGG CAACCAGCAA AAAATCCTCA TTGCCAAATG CCTGGAAGCC
TCGCCGCAAG TATTGATTGT CGATGAGCCG ACGCGCGGCG TGGATGTCTC GGCGCGTAAT
GATATCTACC AACTGTTGCG CAGCATCGCC GCACAGAATG TGGCTGTGCT GCTTATCTCC
TCCGACCTGG AAGAGATCGA ACTGATGGCA GATCGCGTGT ATGTGATGCA TCAGGGCGAA
ATTGCCCACT CTGCACTGAC CGGGCGCGAT ATTAATGTCG AGACTATTAT GCGCGTTGCC
TTCGGCGATA GTCAGCGTCA GGAGGCGTCA TGCTGA
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| Protein sequence | MQTSDTRALP LLCARSVYKQ YSGVNVLKGI DFTLHQGEVH ALLGGNGAGK STLMKIIAGI
TPADSGTLEI GGNNYARLTP VHAHQLGIYL VPQEPLLFSS LSIKENILFG LAKKQLSMQK
MKNLLAALGC QFDLHSLAGS LDVADRQMVE ILRGLMRDSR ILILDEPTAS LTPAETERLF
TRLQELLATG VGIVFISHKL PEIRQIADRI SVMRDGTIAL SGKTSELSTD DIIQAITPVV
REKSLSASQK LWLELPGNRP QHAAGTPVLT LENLTGEGFR NVSLTLNAGE ILGLAGLVGA
GRTELAETLY GLRTLRGGRI MLNGNEINKL STGERLLRGL VYLPEDRQSS GLNLDASLAW
NVCALTHNLR GFWAKTAKDN ATLERYRRAL NIKFNQPEQA ARTLSGGNQQ KILIAKCLEA
SPQVLIVDEP TRGVDVSARN DIYQLLRSIA AQNVAVLLIS SDLEEIELMA DRVYVMHQGE
IAHSALTGRD INVETIMRVA FGDSQRQEAS C
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