| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1588 |
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| Symbol | |
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| ID | 5592241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 1605132 |
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| End bp | 1605662 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640920741 |
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| Product | protein FimF-like protein |
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| Protein accession | YP_001458297 |
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| Protein GI | 157160979 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 0.860042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATACA ATAACATTAT TTTCCTCGGT TTATGTCTGG GGTTAACCAC CTATTCTGCT
TTATCCGCAG ATAGCGTTAT TAAAATTAGC GGGCGCGTCC TCGATTATGG CTGCACAGTC
TCATCGGATT CGCTTAATTT TACCGTAGAT CTCCAAAAAA ACAGTGCCAG ACAATTTCCA
ACGACCGGTA GCACAAGTCC AGCCGTCCCT TTTCAGATTA CGTTAAGTGA ATGCAGCAAA
GGGACAACGG GGGTTCGGGT TGCATTTAAC GGTATTGAGG ATGCAGAAAA TAATACTTTG
TTGAAACTGG ATGAAGGAAG CAATACGGCC TCCGGTTTGG GTATAGAAAT ATTGGACGCA
AATATGCGTC CGGTGAAACT GAATGATCTT CATGCCGGGA TGCAGTGGAT CCCACTGGTA
CCAGAACAGA ACAATATTTT GCCTTACTCC GCTCGTCTGA AGTCAACTCA GAAGTCCGTC
AATCCGGGAC TGGTGAGGGC TTCGGCAACC TTTACCCTTG AATTTCAATA A
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| Protein sequence | MKYNNIIFLG LCLGLTTYSA LSADSVIKIS GRVLDYGCTV SSDSLNFTVD LQKNSARQFP
TTGSTSPAVP FQITLSECSK GTTGVRVAFN GIEDAENNTL LKLDEGSNTA SGLGIEILDA
NMRPVKLNDL HAGMQWIPLV PEQNNILPYS ARLKSTQKSV NPGLVRASAT FTLEFQ
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