Gene EcHS_A1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1587 
Symbol 
ID5592240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1604616 
End bp1605119 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content45% 
IMG OID640920740 
Productprotein fimG-like protein 
Protein accessionYP_001458296 
Protein GI157160978 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC TTCACAAGAG GTTCCTGTTA GCTACGTTTT GCGCGTTATT CACAGCAACT 
CTCCAGGCCG CCGATGTCAC TATCACTGTT AATGGTCGGG TAGTCGCTAA ACCCTGCACT
ATTCAAACCA AAGAAGCTAA CGTTAATCTC GGGGATCTTT ATACGCGCAA TCTGCAACAA
CCTGGTTCTG CATCTGGCTG GCACAATATT ACTTTGTCAT TAACCGATTG TCCGGTTGAA
ACAAGTGCAG TGACGGCAAT CGTGACAGGT TCAACTGACA ATACGGGTTA TTACAAAAAT
GAAGGTACTG CCGAAAATAT TCAGATAGAG CTGAGGGATG ACCAGGATGC TGCGTTAAAA
AATGGCGATA GCAAAACGGT TATTGTTGAA GAGATCACTC GTAATGCACA GTTTCCACTT
AAGGCAAGAG CTATCACGGT GAATGGAAAC GCAAGCCAGG GAACGATCGA GGCGCTAATC
AATGTGATCT ACACCTGGCA ATAA
 
Protein sequence
MKRLHKRFLL ATFCALFTAT LQAADVTITV NGRVVAKPCT IQTKEANVNL GDLYTRNLQQ 
PGSASGWHNI TLSLTDCPVE TSAVTAIVTG STDNTGYYKN EGTAENIQIE LRDDQDAALK
NGDSKTVIVE EITRNAQFPL KARAITVNGN ASQGTIEALI NVIYTWQ