Gene EcHS_A1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1577 
SymbolgadC 
ID5594807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1585779 
End bp1587314 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content48% 
IMG OID640920730 
Productglutamate:gamma aminobutyrate antiporter 
Protein accessionYP_001458286 
Protein GI157160968 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00910] glutamate:gamma-aminobutyrate antiporter 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTACAT CAGTACAGAC AGGTAAAGCT AAGCAGCTCA CATTACTTGG ATTCTTTGCC 
ATAACGGCAT CGATGGTAAT GGCTGTTTAT GAATACCCTA CCTTCGCAAC ATCGGGCTTT
TCATTAGTCT TCTTCCTGCT ATTAGGCGGG ATTTTATGGT TTATTCCCGT GGGACTTTGT
GCTGCGGAAA TGGCCACCGT CGACGGCTGG GAAGAAGGTG GTGTCTTCGC CTGGGTATCA
AATACTCTGG GGCCGAGATG GGGATTTGCA GCGATCTCAT TTGGCTATCT GCAAATCGCC
ATTGGTTTTA TTCCGATGCT CTATTTCGTG TTAGGGGCAC TCTCCTACAT CCTGAAATGG
CCAGCGCTGA ATGAAGACCC CATTACCAAA ACTATTGCAG CACTCATCAT TCTTTGGGCG
CTGGCATTAA CGCAGTTTGG TGGCACGAAA TACACGGCGC GAATTGCTAA AGTTGGCTTC
TTCGCCGGTA TCCTGTTACC TGCATTTATT TTGATCGCAT TAGCGGCTAT TTATCTGCAC
TCCGGTGCCC CCGTTGCTAT CGAAATGGAT TCGAAGACCT TCTTCCCTGA CTTCTCTAAA
GTGGGCACCC TGGTAGTATT TGTTGCCTTC ATTTTGAGTT ATATGGGCGT AGAAGCATCC
GCAACCCACG TCAATGAAAT GAGCAACCCA GGGCGCGACT ATCCGTTGGC TATGTTACTG
CTGATGGTGG CGGCAATCTG CTTAAGCTCT GTTGGTGGTT TGTCTATTGC GATGGTCATT
CCGGGTAATG AAATCAACCT CTCCGCAGGG GTAATGCAAA CCTTTACCGT TCTGATGTCC
CATGTGGCAC CAGAAATTGA ATGGACGGTT CGCGTGATCT CCGCACTGCT GTTGCTGGGT
GTTCTGGCGG AAATCGCCTC CTGGATTGTT GGTCCTTCTC GCGGGATGTA TGTCACAGCG
CAGAAAAACC TGCTGCCAGC GGCATTCGCT AAAATGAACA AAAATGGCGT ACCGGTAACG
CTGGTCATTT CGCAGCTGGT GATTACGTCT ATCGCGTTGA TCATCCTCAC CAATACCGGT
GGCGGTAACA ACATGTCCTT CCTGATCGCA CTGGCGCTGA CGGTGGTGAT TTATCTGTGT
GCTTATTTCA TGCTGTTTAT TGGCTACATT GTGTTGGTTC TTAAACATCC TGACTTAAAA
CGCACATTTA ATATCCCTGG TGGTAAAGGA GTGAAACTGG TCGTGGCAAT TGTCGGTCTG
CTGACTTCAA TTATGGCGTT TATTGTTTCC TTCCTGCCGC CGGATAACAT CCAGGGTGAT
TCTACCGATA TGTATGTTGA ATTACTGGTT GTTAGTTTCC TGGTGGTACT TGCCCTGCCC
TTTATTCTCT ATGCTGTTCA TGATCGTAAA GGCAAAGCAA ATACCGGCGT CACTCTGGAG
CCAATCAACA GTCAGAACGC ACCAAAAGGT CACTTCTTCC TGCACCCGCG TGCACGTTCA
CCACACTATA TTTTGATGAA TGACAAGAAA CACTAA
 
Protein sequence
MATSVQTGKA KQLTLLGFFA ITASMVMAVY EYPTFATSGF SLVFFLLLGG ILWFIPVGLC 
AAEMATVDGW EEGGVFAWVS NTLGPRWGFA AISFGYLQIA IGFIPMLYFV LGALSYILKW
PALNEDPITK TIAALIILWA LALTQFGGTK YTARIAKVGF FAGILLPAFI LIALAAIYLH
SGAPVAIEMD SKTFFPDFSK VGTLVVFVAF ILSYMGVEAS ATHVNEMSNP GRDYPLAMLL
LMVAAICLSS VGGLSIAMVI PGNEINLSAG VMQTFTVLMS HVAPEIEWTV RVISALLLLG
VLAEIASWIV GPSRGMYVTA QKNLLPAAFA KMNKNGVPVT LVISQLVITS IALIILTNTG
GGNNMSFLIA LALTVVIYLC AYFMLFIGYI VLVLKHPDLK RTFNIPGGKG VKLVVAIVGL
LTSIMAFIVS FLPPDNIQGD STDMYVELLV VSFLVVLALP FILYAVHDRK GKANTGVTLE
PINSQNAPKG HFFLHPRARS PHYILMNDKK H