Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1574 |
Symbol | dos |
ID | 5595149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1580146 |
End bp | 1582569 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640920727 |
Product | cAMP phosphodiesterase |
Protein accession | YP_001458283 |
Protein GI | 157160965 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCAGG ATGCAGAGGT AATCATGAAG CTAACCGATG CGGAAAATGC CGCCGATGGC ATTTTTTTCC CCGCCCTTGA ACAAAATATG ATGGGCGCGG TGTTAATTAA CGAAAATGAT GAAGTGATGT TTTTCAACCC CGCCGCAGAG AAGCTCTGGG GATACAAACG TGAAGAAGTC ATTGGCAATA ACATTGATAT GCTGATTCCG CGGGATTTGC GTCCTGCGCA TCCTGAATAC ATTCGTCATA ACCGTGAAGG CGGTAAAGCG CGTGTTGAGG GGATGAGTCG GGAGCTGCAG CTGGAGAAAA AAGACGGCAG TAAAATCTGG ACCCGTTTTG CGCTATCGAA AGTGAGCGCC GAGGGGAAAG TTTATTACCT GGCGCTGGTA CGGGATGCCA GCGTAGAAAT GGCGCAAAAA GAACAGACCC GACAATTGAT TATTGCCGTT GACCATCTCG ACCGACCGGT GATTGTCCTC GATCCGGAAC GCCATATTGT GCAGTGCAAT CGCGCATTTA CCGAAATGTT TGGTTACTGC ATTAGCGAAG CCAGCGGTAT GCAGCCCGAT ACACTCCTGA ACATTCCTGA ATTCCCTGCC GATAACCGCA TTCGTTTACA ACAGTTGCTA TGGAAAACCG CCCGCGATCA GGACGAATTT CTGCTGTTGA CGCGCACCGG TGAAAAAATC TGGATTAAAG CCTCTATCAG CCCGGTTTAT GACGTGCTCG CGCATCTGCA GAACCTGGTA ATGACTTTCT CGGATATCAC CGAAGAACGG CAGATTCGCC AGCTTGAAGG CAATATTCTC GCCGCCATGT GCAGCAGCCC GCCATTTCAT GAAATGGGGG AAATCATTTG TCGTAACATC GAATCTGTAC TCAACGAATC GCATGTTTCG CTGTTCGCAC AGCGCAACGG GATGCCGATA CACTGGGCGT CATCTTCCCA CGGTGCAGAA ATTCAAAATG CGCAAAGCTG GTCAGCGACC ATTCGTCAGC GTGATGGCGC GCCTGCGGGG ATCCTGCAAA TTAAAACCTC GTCAGGAGCA GAAACCAGCG CCTTTATCGA ACGCGTGGCA GATATCAGCC AGCATATGGC CGCGCTGGCG CTGGAACAGG AAAAAAGCCG TCAGCATATT GAACAACTCA TCCAATTTGA TCCGATGACC GGTCTGCCAA ATCGCAATAA CCTGCACAAT TACCTCGATG ACCTGGTCGA CAAAGCCGTC TCTCCCGTGG TGTATCTCAT CGGTGTTGAC CATATTCAGG ATGTGATTGA TAGCCTTGGC TATGCGTGGG CCGATCAGGC ATTGCTGGAA GTGGTCAATC GCTTTCGTGA AAAACTCAAA CCGGATCAGT ATCTCTGTCG TATCGAAGGT ACGCAGTTTG TCCTCGTGAG CCTCGAAAAC GACGTCAGTA ACATTACCCA AATCGCCGAT GAGCTACGGA ATGTGGTCAG CAAGCCGATA ATGATTGACG ATAAACCCTT CCCGCTTACC TTGAGTATTG GCATCAGCTA CGACGTGGGT AAAAACCGCG ATTACTTGCT CTCCACTGCT CACAATGCAA TGGATTATAT TCGCAAGAAT GGCGGTAACG GCTGGCAGTT CTTCAGCCCG GCGATGAACG AAATGGTAAA AGAGCGTTTG GTTTTAGGCG CAGCGCTGAA AGAAGCGATT AGCAATAACC AACTGAAACT GGTTTACCAG CCGCAAATCT TCGCAGAAAC GGGTGAACTG TACGGCATCG AAGCCCTTGC TCGCTGGCAC GATCCCCTGC ATGGTCATGT GCCCCCTTCA CGGTTTATTC CTCTCGCAGA AGAGATTGGT GAAATCGAAA ATATTGGGCG CTGGGTCATC GCGGAAGCTT GCCGTCAGTT AGCAGAATGG CGTAGCCAGA ATATTCATAT CCCGGCGTTA TCCGTGAACT TGTCGGCGCT GCACTTTCGC AGTAATCAAC TGCCTTATCA GGTGTCTGAT GCAATGCACG CCTGGGGTAT TGACGGCCAC CAGCTGACGG TAGAAATCAC GGAAAGCATG ATGATGGAAC ACGATACCGA AATCTTTAAG CGCATTCAGA TCCTGCGTGA TATGGGCGTG GGCTTATCGG TAGATGATTT TGGTACGGGC TTTTCCGGAT TATCCCGCTT AGTCAGTCTT CCGGTAACGG AAATCAAAAT TGACAAAAGT TTTGTCGATC GTTGTCTGAC CGAAAAACGC ATCCTTGCCT TACTTGAAGC CATTACCAGC ATTGGGCAAA GCCTCAATTT AACCGTCGTG GCGGAAGGCG TCGAAACCAA AGAGCAATTT GAGATGCTAC GCAAGATCCA CTGTCGCGTT ATTCAGGGAT ATTTCTTTTC CCGCCCCCTA CCCGCCGAAG AAATTCCAGG CTGGATGAGC AGCGTGTTAC CGCTGAAAAT CTGA
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Protein sequence | MRQDAEVIMK LTDAENAADG IFFPALEQNM MGAVLINEND EVMFFNPAAE KLWGYKREEV IGNNIDMLIP RDLRPAHPEY IRHNREGGKA RVEGMSRELQ LEKKDGSKIW TRFALSKVSA EGKVYYLALV RDASVEMAQK EQTRQLIIAV DHLDRPVIVL DPERHIVQCN RAFTEMFGYC ISEASGMQPD TLLNIPEFPA DNRIRLQQLL WKTARDQDEF LLLTRTGEKI WIKASISPVY DVLAHLQNLV MTFSDITEER QIRQLEGNIL AAMCSSPPFH EMGEIICRNI ESVLNESHVS LFAQRNGMPI HWASSSHGAE IQNAQSWSAT IRQRDGAPAG ILQIKTSSGA ETSAFIERVA DISQHMAALA LEQEKSRQHI EQLIQFDPMT GLPNRNNLHN YLDDLVDKAV SPVVYLIGVD HIQDVIDSLG YAWADQALLE VVNRFREKLK PDQYLCRIEG TQFVLVSLEN DVSNITQIAD ELRNVVSKPI MIDDKPFPLT LSIGISYDVG KNRDYLLSTA HNAMDYIRKN GGNGWQFFSP AMNEMVKERL VLGAALKEAI SNNQLKLVYQ PQIFAETGEL YGIEALARWH DPLHGHVPPS RFIPLAEEIG EIENIGRWVI AEACRQLAEW RSQNIHIPAL SVNLSALHFR SNQLPYQVSD AMHAWGIDGH QLTVEITESM MMEHDTEIFK RIQILRDMGV GLSVDDFGTG FSGLSRLVSL PVTEIKIDKS FVDRCLTEKR ILALLEAITS IGQSLNLTVV AEGVETKEQF EMLRKIHCRV IQGYFFSRPL PAEEIPGWMS SVLPLKI
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