| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1573 |
|---|
| Symbol | ddpX |
|---|
| ID | 5592256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1579307 |
|---|
| End bp | 1579888 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640920726 |
|---|
| Product | D-alanyl-D-alanine dipeptidase |
|---|
| Protein accession | YP_001458282 |
|---|
| Protein GI | 157160964 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATA CCACCGAACT GGTTGATTTA GCCGTAATCT TCCCTGATCT GGAGATCGAA
TTGAAATACG CCTGCGCTGA TAACATCACA GGTAAAGCTA TTTATCAGCA AGCGCGTTGT
CTGTTACACA AGGATGCGAT TACCGCGCTG GCGAAAAGTA TCAGCATCGC CCAGCTGTCA
GGGTTACAAC TGGTGATTTA CGATGCGTAT CGCCCACAAC AAGCACAGGC GATGTTGTGG
CAAGCCTGCC CAGACCCGCA ATATGTTGTT GATGTGACGG TCGGTTCTAA TCACAGCCGT
GGCACGGCGA TCGACCTGAC GCTTCGTGAT GAGCACGGGA ACATCCTCGA TATGGACGCA
GGGTTCGATG AAATGCACGA GCGCTCCCAT GCCTATCACC CTTCCGTCCC GCCCGCCGCT
CAGCGCAATC GGCTGTTGCT GAATGCGATA ATGACTGGTG GCGGTTTTGT CGGTATCTCC
AGCGAATGGT GGCACTTCGA ATTACCCCAG GCAGCGAGTT ACCCTCTGCT CGCTGATCAA
TTCTCTTGTT TTATATCCCC TGGCACACAG CACGTCAGTT AA
|
|---|
| Protein sequence | MSDTTELVDL AVIFPDLEIE LKYACADNIT GKAIYQQARC LLHKDAITAL AKSISIAQLS
GLQLVIYDAY RPQQAQAMLW QACPDPQYVV DVTVGSNHSR GTAIDLTLRD EHGNILDMDA
GFDEMHERSH AYHPSVPPAA QRNRLLLNAI MTGGGFVGIS SEWWHFELPQ AASYPLLADQ
FSCFISPGTQ HVS
|
|---|
| |