| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1571 |
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| Symbol | yddR |
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| ID | 5592254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 1576719 |
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| End bp | 1577741 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640920724 |
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| Product | inner membrane ABC transporter permease protein yddR |
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| Protein accession | YP_001458280 |
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| Protein GI | 157160962 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCTTCT GGAGTATTTT ACGCCAACGC TGCTGGGGGC TGGTGCTCGT GGTGGCGGGC
GTCTGCGTGA TTACGTTTAT TATCTCGCAT CTGATCCCTG GTGATCCGGC GCGGTTACTG
GCGGGTGACC GCGCCAGCGA TGCTATCGTG GAAAATATTC GCCAGCAACT GGGACTGGAC
CAGCCACTGT ATGTACAGTT TTACCGCTAC GTCAGCGACC TGTTTCATGG TGACCTGGGA
ACATCCATTC GTACCGGGCG TCCGGTGCTG GAAGAGTTGC GTATATTTTT CCCGGCGACG
CTGGAGCTGG CATTTTGCGC GCTGCTACTG GCACTCCTGA TTGGCATCCC GCTGGGCATA
CTCTCTGCAG TCTGGCGAAA TCGCTGGCTG GATCATCTGG TGCGAATAAT GGCCATTACC
GGAATCTCCA CACCTGCGTT CTGGCTTGGG CTGGGCGTCA TTGTGCTGTT TTATGGTCAT
CTGCAAATTC TTCCCGGCGG CGGAAGGCTT GATTACTGGC TGGATCCACC AACGCACGTT
ACCGGCTTTT ATCTGCTCGA TGCGCTGCTT GAAGGTAACG GTGAAGTCTT CTTCAATGCG
CTGCAACATC TCATCTTACC GGCATTAACG CTGGCGTTCG TTCACCTGGG AATTGTCGCT
CGCCAGATCC GCTCAGCGAT GCTGGAACAA TTGAGTGAAG ACTACATTCG TATCGCCCGG
GCCAGCGGCT TGCCCGGCTG GTATATCGTT CTATGTTATG CGCTACCCAA TGCGTTGATC
CCATCGATTA CCGTATTGGG GCTGGCGCTG GGCGATTTGT TGTATGGCGC AGTGCTCACC
GAAACCGTTT TTGCCTGGCC CGGAATGGGT GCATGGGTAG TAACATCAAT ACAGGCGCTC
GACTTCCCGG CAGTGATGGG CTTTGCCGTC GTGGTTTCAT TTGCTTATGT GCTGGTCAAC
CTGGTGGTGG ATTTGCTCTA TTTGTGGATT GATCCGCGTA TCGGACGTGG AGGTGGTGAA
TGA
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| Protein sequence | MTFWSILRQR CWGLVLVVAG VCVITFIISH LIPGDPARLL AGDRASDAIV ENIRQQLGLD
QPLYVQFYRY VSDLFHGDLG TSIRTGRPVL EELRIFFPAT LELAFCALLL ALLIGIPLGI
LSAVWRNRWL DHLVRIMAIT GISTPAFWLG LGVIVLFYGH LQILPGGGRL DYWLDPPTHV
TGFYLLDALL EGNGEVFFNA LQHLILPALT LAFVHLGIVA RQIRSAMLEQ LSEDYIRIAR
ASGLPGWYIV LCYALPNALI PSITVLGLAL GDLLYGAVLT ETVFAWPGMG AWVVTSIQAL
DFPAVMGFAV VVSFAYVLVN LVVDLLYLWI DPRIGRGGGE
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