Gene EcHS_A1559 details

Gene Information

• Locus tag: EcHS_A1559
• Symbol: fdnI
• ID: 5592039
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1568132
• End bp: 1568803
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640920713
• Product: formate dehydrogenase-N subunit gamma
• Protein accession: YP_001458269
• Protein GI: 157160951
• COG category: [C] Energy production and conversion
• COG ID: [COG2864] Cytochrome b subunit of formate dehydrogenase
• TIGRFAM ID: [TIGR01583] formate dehydrogenase, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAGGA GGATCATCAT GAGTAAGTCG AAAATGATTG TGCGCACCAA ATTTATTGAT 
CGCGCCTGTC ACTGGACCGT GGTGATTTGC TTCTTCCTGG TGGCGCTGTC CGGGATTTCG 
TTCTTCTTCC CGACGCTGCA ATGGCTGACG CAAACCTTCG GTACGCCGCA GATGGGACGC 
ATTTTGCACC CGTTCTTCGG CATTGCGATT TTCGTCGCAC TGATGTTTAT GTTTGTGCGT 
TTTGTGCATC ACAACATCCC GGATAAGAAA GATATTCCGT GGCTGTTGAA CATTGTCGAA 
GTATTAAAAG GCAATGAGCA CAAAGTGGCG GATGTTGGTA AGTACAACGC CGGGCAAAAG 
ATGATGTTCT GGTCGATCAT GAGCATGATT TTCGTGCTGC TGGTGACCGG GGTGATTATC 
TGGCGTCCGT ACTTTGCGCA GTACTTCCCG ATGCAGGTTG TTCGCTACAG CCTGCTGATC 
CACGCGGCTG CCGGCATCAT CCTGATCCAC GCCATCCTGA TCCATATGTA TATGGCATTT 
TGGGTGAAAG GATCGATTAA AGGGATGATC GAAGGGAAGG TAAGTCGTCG CTGGGCGAAG 
AAACACCATC CGCGCTGGTA TCGTGAAATC GAGAAGGCAG AAGCGAAAAA AGAGAGTGAA 
GAAGGGATAT AA 

 

Protein sequence

MTRRIIMSKS KMIVRTKFID RACHWTVVIC FFLVALSGIS FFFPTLQWLT QTFGTPQMGR 
ILHPFFGIAI FVALMFMFVR FVHHNIPDKK DIPWLLNIVE VLKGNEHKVA DVGKYNAGQK 
MMFWSIMSMI FVLLVTGVII WRPYFAQYFP MQVVRYSLLI HAAAGIILIH AILIHMYMAF 
WVKGSIKGMI EGKVSRRWAK KHHPRWYREI EKAEAKKESE EGI