Gene EcHS_A1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1548 
Symbol 
ID5591550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1551777 
End bp1552670 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content53% 
IMG OID640920702 
Producthypothetical protein 
Protein accessionYP_001458258 
Protein GI157160940 
COG category[R] General function prediction only 
COG ID[COG0384] Predicted epimerase, PhzC/PhzF homolog 
TIGRFAM ID[TIGR00654] phenazine biosynthesis protein PhzF family 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGC AGGTGTACCA CGTCGATGCT TTTACCTCAC AACCGTTTCG CGGCAATTCT 
GCCGGTGTTG TTTTCCCCGC CGATAATCTT AGCGAAGCGC AAATGCAGCT TATCGCCCGC
GAGTTAGGCC ATTCGGAAAC TGCTTTTCTG CTGCACAGCG ACGACAGCGA TGTGCGCATC
CGCTACTTTA CGCCAACGGT TGAAGTGCCG ATTTGCGGTC ACGCGACAGT AGCTGCGCAC
TATGTACGTG CGAAGGTGTT AGGTTTAGGA AATTGCACGA TCTGGCAAAC ATCGCTGGCA
GGAAAACATC GCGTGACTAT CGAAAAGCAC AACGATGATT ATCGTATTTC GCTGGAACAA
GGTACGCCGG GCTTTGAACT GCCGCTGGAG GGTGAAGTAC GCGCGGCGAT TATCAACGCA
TTGCATCTTA CTGAAGACGA TATTCTGCCG GGTTTGCCGA TCCAGGTCGC GACGACCGGG
CATTCTAAAG TGATGATCCC ATTGAAGCCG GAAGTGGATA TCGACGCTCT TTCGCCTGAC
CTTAATGCGC TGACCGCTAT CAGTAAACAG ATTGGCTGCA ATGGTTTCTT CCCGTTCCAG
ATCCGTCCAG GCAAAAACGA AACCGATGGT CGCATGTTCT CGCCTGCGAT TGGTATTGTG
GAAGATCCGG TGACTGGCAA TGCCAATGGC CCGATGGGTG CATGGTTGGT ACATCACAAC
GTATTGCCCC ACGATGGCAA GGTGCTGCGT GTTAAAGGCC ATCAGGGGCG CGCATTGGGG
CGTGACGGCG TGATTGAAGT GACGGTGACA ATTCGTGATA ACCAACCGGA AAAAGTCACC
ATTTCTGGCG CGGCGGTGAT TTTGTTTCAT GCCGAATGGG CAATTAAACT CTGA
 
Protein sequence
MKPQVYHVDA FTSQPFRGNS AGVVFPADNL SEAQMQLIAR ELGHSETAFL LHSDDSDVRI 
RYFTPTVEVP ICGHATVAAH YVRAKVLGLG NCTIWQTSLA GKHRVTIEKH NDDYRISLEQ
GTPGFELPLE GEVRAAIINA LHLTEDDILP GLPIQVATTG HSKVMIPLKP EVDIDALSPD
LNALTAISKQ IGCNGFFPFQ IRPGKNETDG RMFSPAIGIV EDPVTGNANG PMGAWLVHHN
VLPHDGKVLR VKGHQGRALG RDGVIEVTVT IRDNQPEKVT ISGAAVILFH AEWAIKL