Gene EcHS_A1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1463 
SymbolompN 
ID5591697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1458952 
End bp1460085 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content47% 
IMG OID640920619 
Productouter membrane protein N 
Protein accessionYP_001458176 
Protein GI157160858 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.510785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCA AAGTACTGGC ACTTTTAATT CCTGCCCTGC TCGCCGCAGG TGCTGCACAT 
GCAGCCGAAG TTTATAATAA AGACGGCAAC AAATTAGATC TGTATGGCAA AGTTGATGGC
CTGCATTATT TTTCTGATAA TTCAGCGAAA GATGGCGACC AGAGCTATGC GCGTCTGGGT
TTTAAAGGCG AAACCCAAAT TAACGATCAA CTCACTGGCT ACGGTCAATG GGAATACAAT
ATTCAGGCAA ACAACACTGA ATCTTCAAAA AACCAGTCAT GGACCCGTCT GGCATTTGCC
GGGCTGAAAT TTGCAGATTA CGGTTCTTTC GATTACGGAC GTAATTATGG CGTAATGTAC
GACATCGAAG GCTGGACCGA TATGCTGCCT GAATTTGGCG GTGACTCTTA TACCAATGCA
GACAACTTTA TGACTGGTCG AGCCAATGGC GTCGCGACTT ATCGTAATAC TGATTTCTTC
GGTCTGGTAA ATGGTCTGAA CTTCGCGGTG CAGTATCAAG GTAACAACGA AGGAGCCAGT
AATGGTCAGG AAGGCACCAA CAACGGACGT GATGTTCGCC ATGAAAACGG TGACGGCTGG
GGTCTTTCCA CAACATATGA TTTAGGCATG GGCTTTAGCG CTGGTGCGGC ATACACCTCT
TCTGACCGCA CCAATGACCA GGTTAACCAT ACTGCGGCGG GTGGTGATAA AGCAGACGCG
TGGACTGCTG GGCTAAAATA CGATGCTAAC AATATTTACC TGGCAACCAT GTATTCAGAA
ACGCGTAATA TGACCCCGTT TGGCGACAGC GATTATGCTG TGGCAAACAA AACCCAGAAT
TTTGAAGTCA CTGCACAGTA CCAGTTTGAT TTTGGTCTGC GTCCGGCAGT CTCTTTCCTG
ATGTCTAAAG GCCGTGACCT GCACGCTGCG GGTGGTGCAG ACAACCCGGC AGGTGTTGAT
GATAAAGATC TGGTTAAATA CGCCGATGTT GGCGCGACTT ACTATTTCAA TAAAAACATG
TCCACCTACG TTGACTATAA AATCAACCTG TTGGATGAAG ATGACAGCTT CTACGCTGCC
AATGGCATCT CTACCGATGA TATTGTCGCT TTAGGTCTGG TTTATCAGTT CTAA
 
Protein sequence
MKSKVLALLI PALLAAGAAH AAEVYNKDGN KLDLYGKVDG LHYFSDNSAK DGDQSYARLG 
FKGETQINDQ LTGYGQWEYN IQANNTESSK NQSWTRLAFA GLKFADYGSF DYGRNYGVMY
DIEGWTDMLP EFGGDSYTNA DNFMTGRANG VATYRNTDFF GLVNGLNFAV QYQGNNEGAS
NGQEGTNNGR DVRHENGDGW GLSTTYDLGM GFSAGAAYTS SDRTNDQVNH TAAGGDKADA
WTAGLKYDAN NIYLATMYSE TRNMTPFGDS DYAVANKTQN FEVTAQYQFD FGLRPAVSFL
MSKGRDLHAA GGADNPAGVD DKDLVKYADV GATYYFNKNM STYVDYKINL LDEDDSFYAA
NGISTDDIVA LGLVYQF