| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1433 |
|---|
| Symbol | |
|---|
| ID | 5590935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | + |
|---|
| Start bp | 1428271 |
|---|
| End bp | 1429353 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640920588 |
|---|
| Product | sugar ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_001458147 |
|---|
| Protein GI | 157160829 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 68 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGT TTTCGTTACA ACATATTCAA AAAATCTACG ATAACCAGGT GCATGTGGTG
AAGGACTTCA ACCTGGAAAT TGCCGATAAA GAGTTCATCG TGTTTGTCGG CCCGTCGGGC
TGCGGTAAGT CGACCACCCT GCGCATGATT GCCGGGCTTG AGGAGATCAG CGGCGGCGAT
CTGTTGATCG ACGGCAAACG AATGAATGAC GTTCCAGCCA AAGCACGCAA TATAGCGATG
GTGTTCCAGA ACTACGCGTT GTATCCGCAT ATGACGGTTT ACGACAACAT GGCGTTTGAT
CTGAAGATGC AAAAAATCGC CAAAGAGGTG ATTGATGAGC GGGTGAACTG GGCGGCGCAA
ATTCTCGGCC TGCGTGAGTA CCTGAAACGT AAGCCGGGGG CGCTTTCCGG CGGGCAACGT
CAGCGAGTGG CGCTTGGGCG GGCGATTGTA CGCGAAGCGG GCGTGTTTTT AATGGATGAA
CCGCTCTCTA ACCTTGATGC CAAGCTGCGC GTGCAAATGC GCGCAGAGAT CAGCAAGCTG
CATCAGAAAC TGAACACCAC CATGATCTAC GTGACCCACG ATCAGACCGA AGCGATGACC
ATGGCGACGC GGATTGTGAT TATGAAAGAC GGGATTGTTC AGCAAGTAGG TGCGCCGAAA
ACCGTTTATA ACCAACCCGC GAATATGTTT GTTTCCGGAT TTATTGGATC ACCAGCGATG
AATTTTATTC GCGGCACGAT CGATGGCGAT AAATTCGTTA CGGAAACGCT TAAATTAACC
ATTCCCGAAG AGAAATTAGC GGTTCTGAAA ACACAGGAAA GTTTGCATAA GCCCATCGTG
ATGGGAATAC GACCGGAAGA TATTCATCCG GACGCGCAAG AGGAAAATAA CATTTCCGCC
AAAATTAGCG TGGCAGAATT AACCGGTGCG GAATTTATGC TCTACACCAC GGTTGGGGGG
CACGAGTTAG TGGTCCGTGC TGGTGCGTTA AATGATTATC ATGCAGGAGA AAATATCACT
ATTCATTTTG ATATGACGAA ATGTCATTTC TTTGATGCAG AAACGGAAAT AGCAATTCGC
TAA
|
|---|
| Protein sequence | MAQFSLQHIQ KIYDNQVHVV KDFNLEIADK EFIVFVGPSG CGKSTTLRMI AGLEEISGGD
LLIDGKRMND VPAKARNIAM VFQNYALYPH MTVYDNMAFD LKMQKIAKEV IDERVNWAAQ
ILGLREYLKR KPGALSGGQR QRVALGRAIV REAGVFLMDE PLSNLDAKLR VQMRAEISKL
HQKLNTTMIY VTHDQTEAMT MATRIVIMKD GIVQQVGAPK TVYNQPANMF VSGFIGSPAM
NFIRGTIDGD KFVTETLKLT IPEEKLAVLK TQESLHKPIV MGIRPEDIHP DAQEENNISA
KISVAELTGA EFMLYTTVGG HELVVRAGAL NDYHAGENIT IHFDMTKCHF FDAETEIAIR
|
|---|
| |