| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1417 |
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| Symbol | gabT1 |
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| ID | 5592396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1413003 |
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| End bp | 1414268 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640920572 |
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| Product | 4-aminobutyrate transaminase |
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| Protein accession | YP_001458131 |
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| Protein GI | 157160813 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA ATGAATTCCA TCAGCGTCGT CTTTCTGCCA CCCCGCGCGG GGTTGGCGTG
ATGTGTAACT TCTTCGCCCA GTCGGCTGAA AACGCTACGC TGAAGGATGT TGAGGGCAAC
GAGTACATCG ATTTCGCCGC AGGCATTGCG GTGCTGAATA CCGGGCATCG CCACCCTGAT
CTGGTCGCGG CGGTGGAGCA GCAACTGCAA CAGTTTACCC ACACCGCGTA TCAGATTGTG
CCGTATGAAA GCTACGTCAC CCTGGCGGAG AAAATCAACG CCCTTGCCCC GGTGAGCGGG
CAGGCCAAAA CCGCGTTCTT CACTACCGGC GCGGAAGCGG TGGAAAACGC GGTGAAAATG
GCTCGCGCCC ATACCGGACG ACCTGGCGTG ATTGCGTTTA GCGGTGGCTT CCACGGTCGT
ACATATATGA CCATGGCGCT GACCGGAAAA GTTGCGCCGT ACAAAATCGG CTTCGGCCCG
TTCCCTGGTT CGGTGTATCA CGTACCTTAT CCGTCAGATT TACACGGCAT TTCAACACAG
GACTCCCTCG ACGCCATCGA ACGCTTGTTT AAATCAGACA TCGAAGCGAA GCAGGTCGCG
GCCATTATTT TCGAACCGGT GCAGGGCGAG GGCGGTTTCA ACGTTGCGCC AAAAGAGCTG
GTTGCCGCCA TTCGCCGCCT GTGCGACGAG CACGGTATTG TGATGATTGC CGATGAAGTG
CAAAGCGGCT TTGCGCGTAC CGGTAAACTG TTTGCCATGG ATCATTACGC CGATAAGCCG
GACTTAATGA CGATGGCGAA AAGCCTCGCG GGCGGGATGC CGCTTTCGGG CGTGGTCGGT
AACGCGAATA TTATGGACGC GCCCGCGCCG GGCGGGTTGG GTGGCACCTA CGCCGGGAAC
CCGCTGGCGG TGGCTGCCGC GCACGCGGTG CTCAATATTA TCGACAAAGA ATCACTCTGC
AAACGCGCGA ATCAACTGGG CCAGCGTCTC AAAAACACGT TGATTGATGC CAAAGAAAGC
GTTCCGGCCA TTGCTGCGGT ACGCGGCCTG GGGTCGATGA TTGCGGCAGA GTTTAACGAT
CCGCAAACGG GCGAGCCGTC AGCGGCGATT GCACAGAAAA TCCAGCAACG CGCGCTGGCG
CAGGGGCTGC TCCTGCTGAC CTGTGGCGCA TACGGCAACG TGATTCGCTT CCTGTATCCG
CTGACCATCC CGGATGCGCA ATTCGATGCG GCAATGAAAA TTTTGCAGGA TGCGCTGAGC
GATTAA
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| Protein sequence | MSNNEFHQRR LSATPRGVGV MCNFFAQSAE NATLKDVEGN EYIDFAAGIA VLNTGHRHPD
LVAAVEQQLQ QFTHTAYQIV PYESYVTLAE KINALAPVSG QAKTAFFTTG AEAVENAVKM
ARAHTGRPGV IAFSGGFHGR TYMTMALTGK VAPYKIGFGP FPGSVYHVPY PSDLHGISTQ
DSLDAIERLF KSDIEAKQVA AIIFEPVQGE GGFNVAPKEL VAAIRRLCDE HGIVMIADEV
QSGFARTGKL FAMDHYADKP DLMTMAKSLA GGMPLSGVVG NANIMDAPAP GGLGGTYAGN
PLAVAAAHAV LNIIDKESLC KRANQLGQRL KNTLIDAKES VPAIAAVRGL GSMIAAEFND
PQTGEPSAAI AQKIQQRALA QGLLLLTCGA YGNVIRFLYP LTIPDAQFDA AMKILQDALS
D
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