Gene EcHS_A1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1411 
Symbol 
ID5592100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1405255 
End bp1406640 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content53% 
IMG OID640920566 
Productamino acid permease 
Protein accessionYP_001458125 
Protein GI157160807 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTA ATTCACCACT GAATATTGCT GCGCAACCCG GCAAAACCCG TCTGCGAAAA 
TCACTGAAAT TGTGGCAGGT GGTAATGATG GGTCTGGCCT ATCTCACGCC GATGACTGTG
TTCGATACTT TTGGCATTGT GTCAGGCATT AGCGACGGTC ACGTTCCGGC GTCCTATTTG
CTGGCGCTGG CGGGCGTGCT GTTTACCGCT ATCAGCTACG GCAAACTGGT TCGCCAGTTT
CCGGAGGCCG GTTCGGCCTA TACCTACGCG CAAAAGTCGA TTAACCCGCA CGTCGGATTT
ATGGTCGGCT GGTCATCACT GCTGGATTAT CTCTTTTTGC CGATGATCAA CGTTTTGTTG
GCGAAAATCT ATCTCTCCGC CCTCTTCCCG GAAGTGCCGC CGTGGGTGTG GGTGGTAACC
TTCGTCGCCA TTTTAACCGC CGCGAATCTG AAGAGCGTCA ACCTGGTCGC TAACTTCAAT
ACCCTGTTTG TGTTGGTGCA AATCTCCATC ATGGTGGTGT TTATCTTCCT GGTGGTTCAG
GGACTGCATA AAGGAGAAGG CGTTGGCACG GTCTGGTCGT TACAGCCGTT TATCAGCGAG
AACGCGCATC TGATTCCGAT TATTACCGGG GCGACGATCG TCTGCTTCTC TTTCCTTGGT
TTCGATGCAG TGACCACACT TTCGGAAGAG ACACCAGACG CCGCACGCGT GATCCCGAAA
GCCATCTTCC TGACGGCGGT CTATGGTGGC GTTATCTTTA TCGCGGCGTC GTTCTTTATG
CAGCTGTTCT TCCCCGATAT CAGCCGCTTT AAAGACCCGG ACGCCGCACT GCCTGAAATT
GCACTCTACG TCGGCGGTAA GCTGTTCCAG TCGATTTTCC TTTGCACCAC GTTTGTGAAC
ACGTTAGCGT CTGGCCTGGC CTCACATGCC AGCGTGTCAC GTCTGCTGTA TGTGATGGGG
CGCGACAATG TGTTTCCGGA GCGCGTGTTT GGCTATGTGC ATCCGAAATG GCGGACTCCG
GCACTGAACG TCATTATGGT CGGGATTGTC GCGATGTCGG CGCTGTTCTT CGATTTAGTT
ACCGCCACAG CGTTAATTAA CTTCGGCGCG TTGGTAGCGT TTACCTTCGT TAACCTGTCG
GTGTTCAACC ACTTCTGGCG GCGCAAAGGA ATGAATAAAA GCTGGAAGGA ACACTTCCAC
TATTTATTAA TGCCGCTGGT TGGCGCGCTG ACGGTGGGCG TGCTGTGGAT TAACCTCGAA
GCCACCTCGC TGACGCTGGG TCTGGTATGG GCTTCGTTAG GCGGCGCATA TTTGTGGTAT
CTGATTCGCC GCTATCGCAA AGTGCCGCTG TACGAAGGTG ACAGAACGCC AGTGAGCGAA
ACGTAA
 
Protein sequence
MAINSPLNIA AQPGKTRLRK SLKLWQVVMM GLAYLTPMTV FDTFGIVSGI SDGHVPASYL 
LALAGVLFTA ISYGKLVRQF PEAGSAYTYA QKSINPHVGF MVGWSSLLDY LFLPMINVLL
AKIYLSALFP EVPPWVWVVT FVAILTAANL KSVNLVANFN TLFVLVQISI MVVFIFLVVQ
GLHKGEGVGT VWSLQPFISE NAHLIPIITG ATIVCFSFLG FDAVTTLSEE TPDAARVIPK
AIFLTAVYGG VIFIAASFFM QLFFPDISRF KDPDAALPEI ALYVGGKLFQ SIFLCTTFVN
TLASGLASHA SVSRLLYVMG RDNVFPERVF GYVHPKWRTP ALNVIMVGIV AMSALFFDLV
TATALINFGA LVAFTFVNLS VFNHFWRRKG MNKSWKEHFH YLLMPLVGAL TVGVLWINLE
ATSLTLGLVW ASLGGAYLWY LIRRYRKVPL YEGDRTPVSE T