Gene EcHS_A1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1388 
SymbolribA 
ID5592486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1386133 
End bp1386723 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content50% 
IMG OID640920543 
ProductGTP cyclohydrolase II 
Protein accessionYP_001458102 
Protein GI157160784 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00000869982 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCTTA AACGTGTGGC AGAAGCCAAA CTGCCAACCC CATGGGGCGA TTTCCTGATG 
GTGGGATTTG AAGAACTGGC AACCGGACAC GATCATGTCG CGCTAGTCTA TGGCGATATT
TCCGGGCATA CCCCGGTACT TGCGCGCGTC CATTCCGAAT GTCTGACCGG TGACGCCCTG
TTCAGCTTGC GCTGCGATTG TGGCTTCCAG CTCGAAGCGG CATTGACGCA AATTGCCGAG
GAAGGCCGTG GTATTTTGCT GTATCACCGT CAGGAAGGTC GTAACATTGG TCTGCTGAAT
AAAATCCGCG CTTACGCACT GCAGGATCAA GGTTACGATA CCGTAGAGGC TAACCACCAG
TTAGGCTTCG CCGCTGATGA GCGCGACTTC ACTCTTTGCG CTGATATGTT CAAACTCCTT
GGCGTCAATG AAGTCCGCTT GTTAACCAAT AACCCGAAAA AAGTCGAAAT TCTGACCGAA
GCAGGGATTA ATATTGTTGA ACGCGTACCA TTGATTGTAG GTCGTAACCC CAATAACGAA
CATTATCTCG ATACCAAAGC CGAGAAAATG GGCCATTTGC TGAACAAATA A
 
Protein sequence
MQLKRVAEAK LPTPWGDFLM VGFEELATGH DHVALVYGDI SGHTPVLARV HSECLTGDAL 
FSLRCDCGFQ LEAALTQIAE EGRGILLYHR QEGRNIGLLN KIRAYALQDQ GYDTVEANHQ
LGFAADERDF TLCADMFKLL GVNEVRLLTN NPKKVEILTE AGINIVERVP LIVGRNPNNE
HYLDTKAEKM GHLLNK