Gene EcHS_A1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1376 
Symbol 
ID5592875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1371155 
End bp1371775 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content49% 
IMG OID640920531 
Producthypothetical protein 
Protein accessionYP_001458090 
Protein GI157160772 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGT TTTTTTATAT TCATCCTGAT AACCCACAGC AACGTCTGAT CAACCAGGCG 
GTGGAGATCG TGCGTAAAGG CGGGGTGATT GTTTATCCAA CTGATTCCGG CTATGCGCTC
GGCTGTAAAA TTGAAGATAA AAACGCGATG GAGCGTATTT GTCGTATTCG CCAGCTGCCG
GACGGTCACA ACTTTACCCT GATGTGTCGC GATCTTTCTG AACTCTCGAC CTATTCATTT
GTGGATAACG TTGCGTTTCG TTTAATGAAA AACAACACGC CGGGCAACTA TACCTTCATC
CTGAAGGGGA CGAAGGAAGT GCCACGCCGT CTGTTGCAGG AAAAACGCAA AACCATCGGT
ATGCGTGTGC CTTCTAACCC GATTGCGCAG GCGTTGCTTG AAGCACTGGG CGAACCGATG
CTTTCCACTT CGCTAATGCT GCCAGGCAGC GAATTTACCG AATCCGATCC CGAAGAAATT
AAAGACCGTC TGGAAAAACA GGTAGATTTG ATTATTCACG GCGGCTATCT CGGGCAGAAA
CCGACAACGG TTATTGATCT TACCGATGAT ACGCCGGTCG TGGTGCGTGA AGGCGTAGGT
GATGTGAAGC CTTTCTTATA A
 
Protein sequence
MSQFFYIHPD NPQQRLINQA VEIVRKGGVI VYPTDSGYAL GCKIEDKNAM ERICRIRQLP 
DGHNFTLMCR DLSELSTYSF VDNVAFRLMK NNTPGNYTFI LKGTKEVPRR LLQEKRKTIG
MRVPSNPIAQ ALLEALGEPM LSTSLMLPGS EFTESDPEEI KDRLEKQVDL IIHGGYLGQK
PTTVIDLTDD TPVVVREGVG DVKPFL