Gene EcHS_A1365 details

Gene Information

• Locus tag: EcHS_A1365
• Symbol: ompW
• ID: 5593128
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1361077
• End bp: 1361715
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640920520
• Product: outer membrane protein W
• Protein accession: YP_001458079
• Protein GI: 157160761
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3047] Outer membrane protein W

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 0.0200008
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGT TAACAGTGGC GGCTTTGGCA GTAACAACTC TTCTCTCTGG CAGTGCCTTT 
GCGCATGAAG CAGGCGAATT TTTTATGCGT GCAGGTTCTG CAACCGTACG TCCAACAGAA 
GGTGCTGGTG GTACGTTAGG AAGTCTGGGT GGATTCAGCG TGACCAATAA CACGCAACTG 
GGCCTTACGT TTACTTATAT GGCGACCGAC AACATTGGTG TGGAATTACT GGCAGCGACG 
CCGTTCCGCC ATAAAATCGG CACCCGGGCG ACCGGCGATA TTGCAACCGT TCATCATCTG 
CCACCAACAC TGATGGCGCA GTGGTATTTT GGTGATGCCA GCAGCAAATT CCGTCCTTAC 
GTTGGGGCAG GTATTAACTA CACCACCTTC TTTGATAATG GATTTAACGA TCATGGCAAA 
GAGGCAGGGC TTTCCGATCT CAGTCTGAAA GATTCCTGGG GAGCTGCCGG GCAGGTGGGG 
GTTGATTATC TGATTAACCG TGACTGGTTG GTTAACATGT CAGTGTGGTA CATGGATATC 
GATACCACCG CCAATTATAA GCTGGGCGGT GCACAGCAAC ACGATAGCGT ACGCCTCGAT 
CCGTGGGTGT TTATGTTCTC AGCAGGATAT CGTTTTTAA 

 

Protein sequence

MKKLTVAALA VTTLLSGSAF AHEAGEFFMR AGSATVRPTE GAGGTLGSLG GFSVTNNTQL 
GLTFTYMATD NIGVELLAAT PFRHKIGTRA TGDIATVHHL PPTLMAQWYF GDASSKFRPY 
VGAGINYTTF FDNGFNDHGK EAGLSDLSLK DSWGAAGQVG VDYLINRDWL VNMSVWYMDI 
DTTANYKLGG AQQHDSVRLD PWVFMFSAGY RF