Gene EcHS_A1305 details

Gene Information

• Locus tag: EcHS_A1305
• Symbol: dhaR
• ID: 5593171
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1299505
• End bp: 1301424
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640920462
• Product: DNA-binding transcriptional regulator DhaR
• Protein accession: YP_001458023
• Protein GI: 157160705
• COG category: [K] Transcription; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3284] Transcriptional activator of acetoin/glycerol metabolism

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGGCG CTTTTAACAA CGATGGTCGG GGCATATCTC CCTTAATTGC AACCTCCTGG 
GAGCGATGCA ATAAGCTGAT GAAACGGGAG ACATGGAACG TACCACATCA GGCCCAGGGC 
GTGACATTTG CTTCTATTTA TCGGCGTAAG AAAGCGATGC TGACGCTCGG GCAGGCTGCG 
CTGGAAGATG CCTGGGAATA TATGGCACCG CGAGAGTGTG CGCTGTTTAT CCTCGATGAA 
ACCGCCTGCA TTCTCAGCCG TAATGGCGAT CCGCAAACCT TGCAGCAGCT AAGTGCACTG 
GGATTCAATG ACGGCACGTA TTGCGCCGAG GGAATTATTG GTACTTGTGC GCTATCGTTA 
GCGGCTATCT CTGGTCAGGC CGTGAAAACG ATGGCCGATC AACATTTCAA ACAGGCACTC 
TGGAACTGGG CCTTTTGTGC AACGCCGTTG TTTGACAGCA AGGGCCGATT GACGGGAACA 
ATAGCGCTGG CGTGTCCGGT TGAGCAAACT ACCGCAGCTG ATTTGCCGTT GACGTTGGCA 
ATCGCCCGCG AGGTCGGAAA TTTACTGCTG ACGGACAGTT TGCTCGCTGA AACTAACCGT 
CATTTAAATC AACTTAATGC CCTGTTAGAA AGTATGGATG ATGGCGTGAT TAGCTGGGAT 
GAGCAGGGTA ATTTGCAATT TATTAATGCC CAGGCGGCGC GGGTCTTGCG CCTTGACGCG 
ACGGCAAGTC AGGGACGGGC AATCACTGAA CTCTTAACGT TACCCGCCGT ATTGCAACAA 
GCAATAAAAC AGGCACATCC GCTCAAACAC GTAGAAGCAA CCTTTGAAAG CCAGCACCAG 
TTTATTGATG CGGTGATAAC CCTTAAACCG ATAATAGAAA CGCAGGGAAC CAGCTTTATT 
TTGTTGCTCC ATCCTGTGGA ACAGATGCGG CAGTTAATGA CCAGTCAATT AGGAAAAGTC 
AGCCATACCT TCGCTCATAT GCCACAGGAC GATCCGCAAA CCCGCCGCTT GATTCATTTT 
GGTCGCCAGG CGGCGCGCAG TAGCTTTCCT GTCCTGCTTT GTGGAGAAGA GGGCGTGGGC 
AAGGCACTGC TAAGTCAGGC AATTCATAAT GAAAGCGAGC GTGCTGCAGG TCCTTATATC 
GCCGTCAATT GTGAGTTATA TGGTGATGCT GCGCTGGCGG AAGAATTTAT TGGTGGCGAT 
CGCACGGACA ATGAAAATGG CCGTCTGAGT CGGCTGGAAC TGGCACACGG CGGCACGCTG 
TTTCTTGAAA AGATTGAATA TCTGGCGGTG GAGTTACAGT CTGCTTTGCT TCAGGTTATC 
AAGCAGGGGG TTATCACGCG ACTGGATGCG CGGCGTTTAA TACCAATTGA TGTCAAAGTG 
ATTGCCACAA CGACCGCGGA CCTCGCAATG CTGGTGGAAC AAAATCGTTT TAGTCGCCAG 
CTGTATTACG CGCTGCATGC ATTTGAAATT ACCATCCCGC CTCTGCGTAT GCGGCGTGGC 
AGCATTCCGG CGCTGGTGAA TAACAAATTA CGCAGTCTTG AAAAACGCTT CTCTACGCGG 
CTGAAAATTG ATGACGATGC CCTCGCTCGC CTGGTTTCTT GTGCATGGCC AGGCAACGAT 
TTTGAACTTT ACAGCGTCAT CGAGAATCTT GCTCTGAGTA GTGATAACGG GCGCATTCGC 
GTCAGTGATT TGCCGGAACA TCTGTTTACC GAGCAGGCGA CAGATGATGT CAGCGCCACC 
CGCCTTTCCA CCAGTCTGTC ATTTGCGGAA GTTGAAAAAG AGGCAATTAT TAACGCAGCC 
CAGGTCACAG GCGGTCGCAT TCAGGAAATG TCGGCTTTAC TTGGGATCGG CCGCACTACG 
CTGTGGCGGA AAATGAAGCA ACATGGCATT GATGCAGGGC AGTTTAAGCG CCGGGTATGA 

 

Protein sequence

MSGAFNNDGR GISPLIATSW ERCNKLMKRE TWNVPHQAQG VTFASIYRRK KAMLTLGQAA 
LEDAWEYMAP RECALFILDE TACILSRNGD PQTLQQLSAL GFNDGTYCAE GIIGTCALSL 
AAISGQAVKT MADQHFKQAL WNWAFCATPL FDSKGRLTGT IALACPVEQT TAADLPLTLA 
IAREVGNLLL TDSLLAETNR HLNQLNALLE SMDDGVISWD EQGNLQFINA QAARVLRLDA 
TASQGRAITE LLTLPAVLQQ AIKQAHPLKH VEATFESQHQ FIDAVITLKP IIETQGTSFI 
LLLHPVEQMR QLMTSQLGKV SHTFAHMPQD DPQTRRLIHF GRQAARSSFP VLLCGEEGVG 
KALLSQAIHN ESERAAGPYI AVNCELYGDA ALAEEFIGGD RTDNENGRLS RLELAHGGTL 
FLEKIEYLAV ELQSALLQVI KQGVITRLDA RRLIPIDVKV IATTTADLAM LVEQNRFSRQ 
LYYALHAFEI TIPPLRMRRG SIPALVNNKL RSLEKRFSTR LKIDDDALAR LVSCAWPGND 
FELYSVIENL ALSSDNGRIR VSDLPEHLFT EQATDDVSAT RLSTSLSFAE VEKEAIINAA 
QVTGGRIQEM SALLGIGRTT LWRKMKQHGI DAGQFKRRV