Gene EcHS_A1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1286 
SymbolumuD 
ID5595341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1279206 
End bp1279625 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content48% 
IMG OID640920443 
ProductDNA polymerase V subunit UmuD 
Protein accessionYP_001458004 
Protein GI157160686 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000137402 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTA TCAAGCCTGC GGATCTCCGC GAAATTGTGA CTTTTCCGCT ATTTAGCGAT 
CTTGTTCAGT GTGGCTTTCC TTCACCGGCA GCAGATTACG TTGAACAGCG CATCGATCTG
AATCAACTGT TGATCCAGCA TCCCAGCGCG ACTTACTTCG TCAAAGCAAG TGGTGATTCT
ATGATTGATG GTGGAATTAG TGACGGTGAT TTACTGATTG TCGATAGCGC TATTACCGCC
AGCCATGGTG ATATTGTCAT CGCTGCTGTT GACGGCGAGT TTACGGTGAA AAAATTGCAA
CTACGCCCGA CGGTACAGCT TATTCCCATG AACAGTGCGT ACTCGCCCAT TACCATCAGT
AGCGAAGATA CGCTGGATGT CTTTGGTGTG GTGATCCACG TCGTTAAGGC GATGCGCTGA
 
Protein sequence
MLFIKPADLR EIVTFPLFSD LVQCGFPSPA ADYVEQRIDL NQLLIQHPSA TYFVKASGDS 
MIDGGISDGD LLIVDSAITA SHGDIVIAAV DGEFTVKKLQ LRPTVQLIPM NSAYSPITIS
SEDTLDVFGV VIHVVKAMR