Gene EcHS_A1256 details

Gene Information

• Locus tag: EcHS_A1256
• Symbol: icd
• ID: 5594410
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: +
• Start bp: 1257542
• End bp: 1258792
• Gene Length: 1251 bp
• Protein Length: 416 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640920416
• Product: isocitrate dehydrogenase
• Protein accession: YP_001457978
• Protein GI: 157160660
• COG category: [C] Energy production and conversion
• COG ID: [COG0538] Isocitrate dehydrogenases
• TIGRFAM ID: [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 0.00899143
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAGTA AAGTAGTTGT TCCGGCACAA GGCAAGAAGA TCACCCTGCA AAACGGCAAA 
CTCAACGTTC CTGAAAATCC GATTATCCCT TACATTGAAG GTGATGGAAT CGGTGTAGAT 
GTAACCCCAG CCATGCTGAA AGTGGTCGAC GCTGCAGTCG AGAAAGCCTA TAAAGGCGAG 
CGTAAAATCT CCTGGATGGA AATTTACACC GGTGAAAAAT CCACACAGGT TTATGGTCAG 
GACGTCTGGC TGCCTGCTGA AACTCTTGAT CTGATTCGTG AATATCGCGT TGCCATTAAA 
GGTCCGCTGA CCACTCCGGT TGGTGGCGGT ATTCGCTCTC TGAACGTTGC CCTGCGCCAG 
GAACTGGATC TCTACATCTG CCTGCGTCCG GTACGTTACT ATCAGGGCAC TCCAAGCCCG 
GTTAAACACC CTGAACTGAC CGATATGGTT ATCTTCCGTG AAAACTCGGA AGACATTTAT 
GCGGGTATCG AATGGAAAGC AGACTCTGCC GACGCCGAGA AAGTGATTAA ATTCCTGCGT 
GAAGAGATGG GGGTGAAGAA AATTCGCTTC CCGGAACATT GTGGTATCGG TATTAAGCCG 
TGTTCGGAAG AAGGCACCAA ACGTCTGGTT CGTGCAGCGA TCGAATACGC AATTGCTAAC 
GATCGTGACT CTGTGACTCT GGTGCACAAA GGCAACATCA TGAAGTTCAC CGAAGGAGCG 
TTTAAAGACT GGGGCTACCA GCTGGCGCGT GAAGAGTTTG GCGGTGAACT GATCGACGGT 
GGCCCGTGGC TGAAAGTTAA AAACCCGAAC ACTGGCAAAG AGATCGTCAT TAAAGACGTG 
ATTGCTGATG CATTCCTGCA ACAGATCCTG CTGCGTCCGG CTGAATATGA TGTTATCGCC 
TGTATGAACC TGAACGGTGA CTACATTTCT GACGCCCTGG CAGCGCAGGT TGGCGGTATC 
GGTATCGCCC CTGGTGCAAA CATCGGTGAC GAATGCGCCC TGTTTGAAGC CACCCACGGT 
ACTGCGCCGA AATATGCCGG TCAGGACAAA GTAAATCCTG GCTCTATTAT TCTCTCCGCT 
GAGATGATGC TGCGCCATAT GGGTTGGACT GAAGCGGCTG ACCTGATTGT TAAAGGTATG 
GAAGGCGCAA TCAATGCCAA GACCGTAACT TATGACTTCG AACGTCTGAT GGAAGGCGCT 
AAGCTGCTGA AATGTTCAGA GTTTGGTGAA GCGATCATCG AAAACATGTA A 

 

Protein sequence

MESKVVVPAQ GKKITLQNGK LNVPENPIIP YIEGDGIGVD VTPAMLKVVD AAVEKAYKGE 
RKISWMEIYT GEKSTQVYGQ DVWLPAETLD LIREYRVAIK GPLTTPVGGG IRSLNVALRQ 
ELDLYICLRP VRYYQGTPSP VKHPELTDMV IFRENSEDIY AGIEWKADSA DAEKVIKFLR 
EEMGVKKIRF PEHCGIGIKP CSEEGTKRLV RAAIEYAIAN DRDSVTLVHK GNIMKFTEGA 
FKDWGYQLAR EEFGGELIDG GPWLKVKNPN TGKEIVIKDV IADAFLQQIL LRPAEYDVIA 
CMNLNGDYIS DALAAQVGGI GIAPGANIGD ECALFEATHG TAPKYAGQDK VNPGSIILSA 
EMMLRHMGWT EAADLIVKGM EGAINAKTVT YDFERLMEGA KLLKCSEFGE AIIENM