| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1254 |
|---|
| Symbol | |
|---|
| ID | 5594041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1256246 |
|---|
| End bp | 1256707 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640920414 |
|---|
| Product | NUDIX family hydrolase |
|---|
| Protein accession | YP_001457976 |
|---|
| Protein GI | 157160658 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 0.440982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAAAC CGCACGTTAC CGTTGCTTGC GTGGTGCACG CAGAAGGCAA ATTTTTAGTC
GTTGAAGAGA CGATTAATGG TAAAGCGTTA TGGAACCAAC CTGCCGGGCA TCTGGAAGCC
GATGAAACCT TAGTGGAAGC CGCCGCCCGT GAACTGTGGG AAGAAACCGG CATCAGCGCG
CAGCCGCAAC ACTTTATTCG TATGCATCAG TGGATTGCGC CAGATAAAAC GCCGTTTTTG
CGTTTCCTCT TTGCCATTGA GCTTGAGCAA ATATGCCCGA CCCAGCCTCA TGACAGCGAT
ATCGACTGCT GCCGTTGGGT CAGCGCCGAA GAAATTTTAC AGGCGTCAAA TCTTCGTTCG
CCGCTGGTGG CGGAAAGTAT TCGTTGTTAT CAAAGCGGGC AACGTTATCC GCTGGAGATG
ATTGGCGATT TTAACTGGCC TTTTACAAAG GGTGTCATCT AA
|
|---|
| Protein sequence | MFKPHVTVAC VVHAEGKFLV VEETINGKAL WNQPAGHLEA DETLVEAAAR ELWEETGISA
QPQHFIRMHQ WIAPDKTPFL RFLFAIELEQ ICPTQPHDSD IDCCRWVSAE EILQASNLRS
PLVAESIRCY QSGQRYPLEM IGDFNWPFTK GVI
|
|---|
| |