| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1248 |
|---|
| Symbol | |
|---|
| ID | 5593354 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1249538 |
|---|
| End bp | 1250659 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640920408 |
|---|
| Product | cupin family protein |
|---|
| Protein accession | YP_001457970 |
|---|
| Protein GI | 157160652 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2850] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACC AACTCACTCT TAACTGGCCC GATTTTCTTG AACGTCACTG GCAGAAACGC
CCGGTGGTGT TAAAACGCGG CTTTAATAAT TTTATTGACC CGATCTCTCC AGACGAGTTG
GCGGGTCTGG CGATGGAAAG CGAAGTCGAC AGTCGACTGG TCAGTCACCA GGATGGCAAA
TGGCAGGTCA GCCACGGTCC GTTCGAAAGC TACGATCATC TCGGTGAAAC TAACTGGTCA
TTGTTAGTGC AAGCAGTAAA TCACTGGCAT GAGCCGACCG CCGCGCTGAT GCGACCGTTC
CGTGAACTAC CGGACTGGCG TATTGATGAT CTGATGATCT CTTTTTCTGT ACCTGGCGGC
GGCGTCGGCC CGCATCTCGA TCAGTACGAC GTGTTTATCA TTCAGGGTAC CGGACGTCGT
CGCTGGCGAG TGGGCGAAAA GCTGCAAATG AAACAGCACT GCCCACACCC GGATCTGTTA
CAGGTCGATC CGTTCGAAGC CATCATCGAT GAAGAGCTGG AGCCTGGCGA TATTCTTTAT
ATTCCGCCAG GATTCCCGCA TGAAGGCTAC GCGCTGGAAA ATGCGATGAA CTATTCCGTG
GGTTTTCGCG CGCCAAATAC GCGGGAATTA ATTAGCGGAT TTGCCGATTA TGTGCTGCAA
CGTGAACTGG GCGGCAACTA CTACAGCGAT CCTGATGTTC CACCTCGCGC TCATCCTGCG
GACGTTCTGC CGCAAGAGAT GGATAAACTG CGTGAGATGA TGCTCGAATT GATCAACCAG
CCGGAACACT TTAAGCAATG GTTTGGCGAG TTTATATCCC AGTCACGTCA TGAACTGGAT
ATCGCGCCGC CAGAGCCGCC TTATCAGCCG GATGAAATCT ACGATGCGCT GAAACAAGGT
GATGTGCTGG TGCGCCTGGG TGGTCTGCGC GTATTGCGCA TTGGCGACGA CGTGTATGCC
AATGGTGAGA AGATCGATTC CCCGCACCGT CCGGCACTGG ATGCACTCGC CAGCAACATT
GCGCTGACCG CGGAGAATTT TGGCGATGCG CTGGAAGATC CGTCATTCCT CGCGATGCTC
GCGGCGCTGG TCAATAGCGG ATACTGGTTC TTCGAAGGGT AA
|
|---|
| Protein sequence | MEYQLTLNWP DFLERHWQKR PVVLKRGFNN FIDPISPDEL AGLAMESEVD SRLVSHQDGK
WQVSHGPFES YDHLGETNWS LLVQAVNHWH EPTAALMRPF RELPDWRIDD LMISFSVPGG
GVGPHLDQYD VFIIQGTGRR RWRVGEKLQM KQHCPHPDLL QVDPFEAIID EELEPGDILY
IPPGFPHEGY ALENAMNYSV GFRAPNTREL ISGFADYVLQ RELGGNYYSD PDVPPRAHPA
DVLPQEMDKL REMMLELINQ PEHFKQWFGE FISQSRHELD IAPPEPPYQP DEIYDALKQG
DVLVRLGGLR VLRIGDDVYA NGEKIDSPHR PALDALASNI ALTAENFGDA LEDPSFLAML
AALVNSGYWF FEG
|
|---|
| |