| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1243 |
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| Symbol | potD |
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| ID | 5593316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | - |
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| Start bp | 1244202 |
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| End bp | 1245248 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640920403 |
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| Product | spermidine/putrescine ABC transporter periplasmic substrate-binding protein |
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| Protein accession | YP_001457965 |
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| Protein GI | 157160647 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.0566185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT GGTCACGCCA CCTGCTCGCG GCGGGTGCTC TGGCACTGGG CATGAGCGCC
GCTCACGCCG ATGACAACAA CACGCTGTAT TTCTACAACT GGACCGAGTA CGTGCCGCCA
GGACTGCTTG AACAGTTCAC CAAAGAAACC GGTATTAAGG TTATCTATTC GACTTACGAG
TCGAACGAAA CCATGTATGC CAAGCTGAAA ACGTACAAAG ACGGTGCCTA TGACCTGGTG
GTTCCTTCAA CCTATTACGT CGATAAAATG CGTAAAGAAG GGATGATCCA GAAGATCGAC
AAGTCGAAGT TAACGAACTT CAGCAATCTC GATCCAGACA TGCTCAATAA GCCGTTTGAC
CCGAATAACG ATTACTCCAT TCCGTATATC TGGGGTGCGA CGGCGATTGG TGTTAACGGT
GATGCGGTGG ATCCGAAATC TGTCACCAGC TGGGCCGATC TGTGGAAGCC TGAGTACAAA
GGCAGCCTGC TGTTGACCGA CGATGCCCGT GAAGTGTTCC AGATGGCGCT GCGTAAGCTG
GGCTACTCCG GTAACACCAC CGATCCGAAA GAGATTGAAG CTGCATATAA TGAGCTGAAA
AAACTGATGC CAAACGTCGC AGCGTTTAAC TCCGATAACC CAGCTAACCC GTACATGGAA
GGCGAAGTTA ACCTCGGCAT GATCTGGAAC GGTTCTGCTT TCGTTGCACG GCAGGCGGGT
ACGCCAATTG ACGTGGTGTG GCCGAAAGAA GGCGGCATTT TCTGGATGGA CAGCCTGGCG
ATCCCGGCAA ATGCCAAAAA CAAAGAAGGC GCGCTGAAAT TGATCAACTT CCTGCTGCGC
CCGGATGTGG CAAAACAGGT TGCTGAAACT ATCGGTTATC CAACGCCAAA CCTTGCGGCG
CGTAAGCTGT TAAGTCCGGA AGTGGCGAAC GATAAAACGC TCTACCCGGA TGCTGAAACC
ATTAAAAATG GCGAATGGCA GAATGACGTT GGCGCAGCCA GCAGCATTTA TGAAGAGTAT
TATCAGAAGC TGAAAGCAGG ACGTTAA
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| Protein sequence | MKKWSRHLLA AGALALGMSA AHADDNNTLY FYNWTEYVPP GLLEQFTKET GIKVIYSTYE
SNETMYAKLK TYKDGAYDLV VPSTYYVDKM RKEGMIQKID KSKLTNFSNL DPDMLNKPFD
PNNDYSIPYI WGATAIGVNG DAVDPKSVTS WADLWKPEYK GSLLLTDDAR EVFQMALRKL
GYSGNTTDPK EIEAAYNELK KLMPNVAAFN SDNPANPYME GEVNLGMIWN GSAFVARQAG
TPIDVVWPKE GGIFWMDSLA IPANAKNKEG ALKLINFLLR PDVAKQVAET IGYPTPNLAA
RKLLSPEVAN DKTLYPDAET IKNGEWQNDV GAASSIYEEY YQKLKAGR
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