Gene EcHS_A1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1222 
Symbol 
ID5592072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1220457 
End bp1221254 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content51% 
IMG OID640920382 
Productputative metallodependent hydrolase 
Protein accessionYP_001457944 
Protein GI157160626 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000000128858 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTAG TCGACTCACA CTGCCATCTC GATGGTCTGG ATTATGAATC TTTGCATAAG 
GACGTGGATG ACGTTCTGGC GAAAGCCGCC GCACGCGATG TGAAATTTTG TCTGGCAGTC
GCCACAACAT TACCGGGTTA TTTACATATG CGGGAGCTGG TAGGCGAACG TGACAACGTC
GTATTTTCTT GTGGCGTGCA TCCACTCAAC CAGAATGATC CCTACGATGT AGAAGATTTA
CGCCGTCTGG CGGCAGAAGA GGGTGTTGTA GCGCTGGGAG AAACCGGGCT GGATTATTAT
TACACACCGG AAACTAAAGT TCGTCAGCAA GAGTCCTTCA TCCATCATAT CCAGATTGGT
CGTGAACTGA ACAAGCCGGT TATCGTCCAT ACCCGTGACG CCCGCGCCGA TACGCTGGCA
ATTCTGCGCG AAGAAAAAGT GACGGATTGC GGTGGCGTAC TACACTGTTT TACAGAGGAC
AGAGAAACGG CGGGCAAATT ACTGGATCTC GGATTTTACA TCTCCTTTTC CGGCATTGTG
ACCTTCCGTA ATGCGGAGCA ACTGCGCGAT GCTGCGCGTT ATGTCCCCCT GGATCGGTTA
CTGGTGGAAA CTGACTCACC TTACCTTGCG CCGGTACCGC ATCGAGGAAA AGAGAATCAA
CCTGCGATGG TTCGTGACGT TGCAGAATAC ATGGCTGTGT TGAAAGGTGT TGCCGTTGAA
GAACTGGCGC AGGTAACCAC CGATAACTTC GCCCGTCTGT TTCACATCGA CGCTTCCCGC
CTTCAATCCA TCCGTTGA
 
Protein sequence
MFLVDSHCHL DGLDYESLHK DVDDVLAKAA ARDVKFCLAV ATTLPGYLHM RELVGERDNV 
VFSCGVHPLN QNDPYDVEDL RRLAAEEGVV ALGETGLDYY YTPETKVRQQ ESFIHHIQIG
RELNKPVIVH TRDARADTLA ILREEKVTDC GGVLHCFTED RETAGKLLDL GFYISFSGIV
TFRNAEQLRD AARYVPLDRL LVETDSPYLA PVPHRGKENQ PAMVRDVAEY MAVLKGVAVE
ELAQVTTDNF ARLFHIDASR LQSIR