Gene EcHS_A1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1163 
Symbol 
ID5591921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand- 
Start bp1168227 
End bp1168730 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content55% 
IMG OID640920322 
ProductIS1, transposase orfB 
Protein accessionYP_001457885 
Protein GI157160567 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value0.452867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGGCA ACAGCCCGCA TTATGGGCGT TGGCCTCAAC ACGATTTTAC GTCACTTAAA 
AAACTCAGGC CGCAGTCGGT AACCTCGCGC ATACAGCCGG GCAGTGACGT CATCGTCTGC 
GCGGAAATGG ACGAACAGTG GGGCTATGTC GGGGCTAAAT CGCGCCAGCG CTGGCTGTTT 
TACGCGTATG ACAGGCTCCG GAAGACGGTT GTTGCGCACG TATTCGGTGA ACGCACTATG 
GCGACGCTGG GGCGTCTTAT GAGCCTGCTG TCACCCTTTG ACGTGGTGAT ATGGATGACG 
GATGGCTGGC CGCTGTATGA ATCCCGCCTG AAGGGAAAGC TGCACGTAAT CAGCAAGCGA 
TATACGCAGC GAATTGAGCG GCATAACCTG AATCTGAGGC AGCACCTGGC ACGGCTGGGA 
CGGAAGTCGC TGTCGTTCTC AAAATCGGTG GAGCTGCATG ACAAAGTCAT CGGGCATTAT 
CTGAACATAA AACACTATCA ATAA
 
Protein sequence
MPGNSPHYGR WPQHDFTSLK KLRPQSVTSR IQPGSDVIVC AEMDEQWGYV GAKSRQRWLF 
YAYDRLRKTV VAHVFGERTM ATLGRLMSLL SPFDVVIWMT DGWPLYESRL KGKLHVISKR 
YTQRIERHNL NLRQHLARLG RKSLSFSKSV ELHDKVIGHY LNIKHYQ