| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1126 |
|---|
| Symbol | |
|---|
| ID | 5594517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1134469 |
|---|
| End bp | 1135164 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640920289 |
|---|
| Product | putative isochorismatase family protein, rutB |
|---|
| Protein accession | YP_001457853 |
|---|
| Protein GI | 157160535 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | [TIGR03614] pyrimidine utilization protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGACGA CATTAACCGC TCGACCGGAA GCCATTACCT TCGATCCGCA GCAAAGTGCG
CTGATCGTGG TGGATATGCA AAACGCCTAT GCCACGCCAG GCGGCTACTT AGATCTCGCC
GGGTTTGATG TCTCAACCAC TCGCCCGGTC ATTGCCAACA TTCAAACCGC CGTGACTGCA
GCGCGAGCGG CAGGGATGTT GATCATCTGG TTTCAAAATG GCTGGGATGA ACAGTATGTC
GAGGCTGGCG GCCCTGGCTC ACCGAATTTT CATAAATCGA ACGCCCTGAA AACCATGCGT
AAACAGCCGC AGCTGCAGGG GAAATTGCTG GCGAAAGGCT CCTGGGATTA TCAACTGGTG
GATGAACTGG TGCCGCAGCC TGGCGATATT GTGCTGCCGA AGCCGCGCTA CAGCGGTTTC
TTCAATACGC CGCTGGACAG CATTTTGCGC AGCCGCGGAA TACGCCATCT GGTTTTCACC
GGCATCGCTA CCAACGTCTG CGTCGAATCG ACGCTACGCG ACGGCTTTTT TCTGGAGTAT
TTCGGCGTGG TGCTGGAAGA CGCAACTCAC CAGGCGGGGC CGGAATTTGC GCAGAAAGCT
GCGTTGTTCA ATATCGAAAC CTTTTTTGGC TGGGTCAGCG ACGTCGAAAC GTTCTGCGAC
GCGCTTTCTC CCACGTCCTT TGCTCGTATC GCTTAA
|
|---|
| Protein sequence | MMTTLTARPE AITFDPQQSA LIVVDMQNAY ATPGGYLDLA GFDVSTTRPV IANIQTAVTA
ARAAGMLIIW FQNGWDEQYV EAGGPGSPNF HKSNALKTMR KQPQLQGKLL AKGSWDYQLV
DELVPQPGDI VLPKPRYSGF FNTPLDSILR SRGIRHLVFT GIATNVCVES TLRDGFFLEY
FGVVLEDATH QAGPEFAQKA ALFNIETFFG WVSDVETFCD ALSPTSFARI A
|
|---|
| |