Gene EcHS_A1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1122 
Symbol 
ID5595296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1132158 
End bp1132652 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content59% 
IMG OID640920285 
Productputative flavin reductase rutF 
Protein accessionYP_001457849 
Protein GI157160531 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID[TIGR03615] pyrimidine utilization flavin reductase protein F 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTG TCGATCAACA AACTTTTCGC GATGCGATGT CCTGCATGGG CGCGGCGGTC 
AATATCATCA CCACGGACGG TCCAGCCGGG CGCGCCGGGT TCACCGCCAG CGCCGTCTGC
AGCGTGACCG ACACGCCGCC CACATTACTG GTGTGCCTGA ATCGTGGGGC GTCCGTCTGG
CCGGTATTCA ATGAAAATCG AACGCTGTGT GTAAATACAC TTAGCGCCGG GCAGGAGCCG
CTTTCAAACC TTTTTGGCGG CAAAACGCCC ATGGAACACC GCTTTGCCGC CGCCCGCTGG
CAGACTGGTG TGACCGGATG CCCGCAACTG GAAGAGGCGC TGGTTTCGTT TGACTGCCGT
ATCAGCCAGG TGGTGAGCGT CGGCACCCAC GACATTTTGT TTTGCGCCAT CGAAGCGATT
CATCGTCACG CCACACCCTA CGGGCTGGTG TGGTTCGATC GCAGTTATCA CGCGCTGATG
CGCCCTGCTT GTTAA
 
Protein sequence
MNIVDQQTFR DAMSCMGAAV NIITTDGPAG RAGFTASAVC SVTDTPPTLL VCLNRGASVW 
PVFNENRTLC VNTLSAGQEP LSNLFGGKTP MEHRFAAARW QTGVTGCPQL EEALVSFDCR
ISQVVSVGTH DILFCAIEAI HRHATPYGLV WFDRSYHALM RPAC