Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcHS_A1095 |
Symbol | ymcB |
ID | 5591528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli HS |
Kingdom | Bacteria |
Replicon accession | NC_009800 |
Strand | - |
Start bp | 1109559 |
End bp | 1110305 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640920258 |
Product | group 4 capsule (G4C) polysaccharide, YmcB |
Protein accession | YP_001457822 |
Protein GI | 157160504 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAT TACAGTCGTA TTTCATTGCC AGCGTACTTT ACGTAATGAC ACCCCATGCC TTTGCGCAAG GAACGGTGAC TATTTATCTG CCTGGCGAAC AACAGACACT TTCCGTTGGC CCCGTGGAAA ATGTTGTCCA GTTGGTGACA CAACCGCAAC TGCGCGATCG CCTCTGGTGG CCTGGTGCCT TGCTGACCGA CTCTGCGGCG AAAGCTAAAG CGCTTAAAGA CTACCAACAT GTCATGGCAC AGCTTGCTTC CTGGGAAGCA GAAGCTGACG ACGATGTGGC GGCAACGATT AAATCCGTGC GCCAGCAGTT ACTCAATCTC AATATCACTG GTCGCTTACC GGTCAAACTG GATCCTGATT TTGTACGAGT GGATGAGAAC AGCAATCCCC CGTTGGTCGG GGACTATACG CTCTATACCG TACAGCGTCC GGTGACTATT ACTCTGCTGG GTGCGGTTTC TGGGGCCGGG CAATTGCCCT GGCAGGCAGG CCGTAGCGTT ACCGATTATC TGCAAGATCA CCCCCGCCTT GCAGGCGCGG ACAAGAATAA CGTTATGGTG ATTACGCCTG AGGGTGAGAC TGTCGTCGCC CCTGTTGCCC TGTGGAATAA AAGACATGTG GAACCACCGC CTGGCAGCCA GCTTTGGTTG GGCTTTTCTG CGCATGTACT GCCCGAAAAA TATGCTGATT TAAATGACCA GATTGTGTCT GTTTTAACGC AACGTGTTCC TGACTGA
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Protein sequence | MNKLQSYFIA SVLYVMTPHA FAQGTVTIYL PGEQQTLSVG PVENVVQLVT QPQLRDRLWW PGALLTDSAA KAKALKDYQH VMAQLASWEA EADDDVAATI KSVRQQLLNL NITGRLPVKL DPDFVRVDEN SNPPLVGDYT LYTVQRPVTI TLLGAVSGAG QLPWQAGRSV TDYLQDHPRL AGADKNNVMV ITPEGETVVA PVALWNKRHV EPPPGSQLWL GFSAHVLPEK YADLNDQIVS VLTQRVPD
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