Gene EcHS_A1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1078 
Symbol 
ID5591703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1092373 
End bp1093032 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content51% 
IMG OID640920243 
Producthypothetical protein 
Protein accessionYP_001457808 
Protein GI157160490 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0000486786 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGTA TTGTTAGTTC TTCACATGAC CGTACATCAC TGCTTAGCAC CCATAAGGTG 
CTGCGTAATA CCTATTTTCT GCTGAGCCTG ACGCTGGCCT TTTCGGCGAT TACCGCAACT
GCCAGTACGG TGCTGATGCT GCCATCTCCG GGTCTGATTC TGACGCTGGT GGGTATGTAT
GGTTTGATGT TCCTGACCTA TAAAACGGCG AATAAGCCGA CCGGGATTAT CTCCGCATTC
GCCTTTACCG GTTTTCTGGG TTATATCCTC GGACCTATTC TGAACACCTA TCTGTCTGCC
GGAATGGGTG ACGTAATCGC TATGGCACTG GGCGGAACGG CGTTAGTGTT CTTCTGCTGC
TCTGCATATG TGCTGACCAC CCGCAAAGAT ATGTCGTTCC TCGGCGGTAT GCTGATGGCG
GGTATTGTGG TGGTGCTGAT TGGTATGGTT GCGAATATCT TCCTGCAGCT GCCTGCTCTG
CATCTGGCGA TCAGCGCGGT CTTCATTCTG ATCTCCTCTG GCGCTATCTT GTTTGAAACC
AGCAACATCA TTCATGGCGG TGAGACGAAC TATATTCGTG CCACGGTTAG CCTGTATGTT
TCGCTGTACA ACATCTTCGT CAGCCTGCTG AGCATTCTGG GCTTCGCTAG CCGCGATTAA
 
Protein sequence
MDRIVSSSHD RTSLLSTHKV LRNTYFLLSL TLAFSAITAT ASTVLMLPSP GLILTLVGMY 
GLMFLTYKTA NKPTGIISAF AFTGFLGYIL GPILNTYLSA GMGDVIAMAL GGTALVFFCC
SAYVLTTRKD MSFLGGMLMA GIVVVLIGMV ANIFLQLPAL HLAISAVFIL ISSGAILFET
SNIIHGGETN YIRATVSLYV SLYNIFVSLL SILGFASRD