| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1070 |
|---|
| Symbol | |
|---|
| ID | 5591786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1085516 |
|---|
| End bp | 1085962 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640920235 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001457800 |
|---|
| Protein GI | 157160482 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3304] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000000025348 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCG TTTTGAACAT TCTGAACTTT GTGCTTGGCG GATTTGCCAC CACTCTGGGC
TGGCTGTTGG CGACTCTGGT CAGTATTGTG CTGATTTTTA CCTTACCGCT GACACGATCC
TGCTGGGAGA TCACTAAACT GTCTCTGGTG CCTTATGGCA ATGAAGCTAT TCATGTCGAT
GAACTGAACC CGGCTGGCAA AAATGTGCTG CTGAATACTG GCGGTACGGT ATTGAATATT
TTCTGGCTGA TTTTCTTTGG CTGGTGGTTA TGCCTGATGC ACATTGCAAC GGGCATCGCA
CAATGTATTT CAATAATTGG CATTCCTGTC GGCATTGCGA ACTTTAAAAT TGCCGCTATT
GCACTATGGC CGGTTGGTCG TCGCGTGGTA TCGGTAGAAA CAGCGCAAGC TGCGCGTGAA
GCCAATGCAC GTCGTCGTTT TGAATAA
|
|---|
| Protein sequence | MRTVLNILNF VLGGFATTLG WLLATLVSIV LIFTLPLTRS CWEITKLSLV PYGNEAIHVD
ELNPAGKNVL LNTGGTVLNI FWLIFFGWWL CLMHIATGIA QCISIIGIPV GIANFKIAAI
ALWPVGRRVV SVETAQAARE ANARRRFE
|
|---|
| |