| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1043 |
|---|
| Symbol | ssuC |
|---|
| ID | 5591078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 1055657 |
|---|
| End bp | 1056448 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640920209 |
|---|
| Product | alkanesulfonate transporter permease subunit |
|---|
| Protein accession | YP_001457774 |
|---|
| Protein GI | 157160456 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACGC CAGTGAAGAA GTGGTTATTG CGCGTTGCCC CCTGGTTTTT ACCGGTGGGC
ATCGTGGCGG TGTGGCAACT GGCCTCCTCG GTTGGCTGGC TGTCGACGCG TATTTTGCCT
TCACCGGAAG GAGTGGTGAC GGCGTTCTGG ACGCTCTCCG CCAGCGGCGA ACTGTGGCAG
CATCTGGCGA TCAGCTCCTG GCGGGCGCTG ATTGGCTTTT CAATTGGCGG ATCGCTGGGG
TTGATTTTGG GACTGATTAG CGGGCTATCT CGCTGGGGAG AACGGCTGCT GGATACCTCA
ATTCAGATGT TGCGCAACGT GCCGCATCTG GCGCTGATCC CGCTGGTGAT TTTGTGGTTT
GGCATTGATG AATCCGCAAA AATCTTTCTG GTGGCGCTCG GTACGCTATT CCCCATTTAT
ATCAACACCT GGCATGGCAT CCGTAATATC GATCGCGGGT TGGTGGAGAT GGCGCGTAGC
TATGGATTAT CCGGCATACC GCTGTTTATC CATGTGATCC TGCCTGGTGC CCTGCCCTCA
ATTATGGTCG GCGTGCGTTT TGCGTTGGGC CTGATGTGGC TGACGCTGAT TGTTGCCGAA
ACCATTTCTG CCAATTCAGG CATTGGTTAT CTGGCGATGA ATGCGCGGGA GTTTTTGCAA
ACGGACGTGG TGGTAGTCGC TATTATTCTT TACGCCCTGC TCGGCAAACT GGCTGACGTC
AGCGCGCAGC TGTTAGAGCG CCTCTGGTTG CGCTGGAACC CGGCTTATCA TTTGAAGGAG
GCCACGGTAT GA
|
|---|
| Protein sequence | MATPVKKWLL RVAPWFLPVG IVAVWQLASS VGWLSTRILP SPEGVVTAFW TLSASGELWQ
HLAISSWRAL IGFSIGGSLG LILGLISGLS RWGERLLDTS IQMLRNVPHL ALIPLVILWF
GIDESAKIFL VALGTLFPIY INTWHGIRNI DRGLVEMARS YGLSGIPLFI HVILPGALPS
IMVGVRFALG LMWLTLIVAE TISANSGIGY LAMNAREFLQ TDVVVVAIIL YALLGKLADV
SAQLLERLWL RWNPAYHLKE ATV
|
|---|
| |