Gene EcHS_A1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A1027 
Symbol 
ID5595110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp1032960 
End bp1033739 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content52% 
IMG OID640920194 
Producthypothetical protein 
Protein accessionYP_001457759 
Protein GI157160441 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.000464041 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTTA CACTGAAAAA AGTGATTGGC AATATGTTGC TGCCACTTCC GCTGATGTTG 
TTGATTATTG GCGCTGGCCT GGCGCTGCTG TGGTTTAGCC GTTTTCAAAA AACCGGGAAG
ATTTTTATTA GCATTGGGTG GCTGGCGCTC TTGTTATTGA GTTTGCAACC GGTAGCCGAC
CGCCTGCTGC GTCCCATCGA AAGCACCTAT CCGACATGGA ATAATTCGCA AAAAGTGGAC
TATATCGTGG TGCTCGGAGG TGGTTATACC TGGAACCCGC AGTGGGCACC GAGCTCTAAT
TTAATCAATA ACAGTCTGCC ACGCCTGAAT GAAGGTATTC GCTTATGGCG CGAAAATCCG
GGATCAAAAC TGATCTTCAC GGGAGGCGTA GCAAAAACCA ATACGGTGAG TACAGCGGAA
GTAGGTGCCA GAGTTGCGCA ATCGCTGGGC GTGCCGCGCG AGCAAATTAT CACCCTGGAT
TTGCCAAAAG ATACCGAAGA AGAAGCTGCA GCAGTGAAAC AGGCGATTGG TGACGCCCCT
TTCCTGCTGG TGACCTCCGC ATCACATCTG CCGCGGGCGA TGATCTTTTT TCAGCAGGAA
GGGTTAAATC CGCTACCAGC CCCGGCGAAT CAGTTGGCCA TCGACTCGCC GCTTAACCCG
TGGGAACGGG CAATCCCTTC TCCGGTCTGG TTGATGCATA GCGATCGTGT TGGCTATGAA
ACGCTTGGCC GTATCTGGCA GTGGCTAAAA GGTTCGTCAG GCGAGCCACG GCAAGAGTGA
 
Protein sequence
MLFTLKKVIG NMLLPLPLML LIIGAGLALL WFSRFQKTGK IFISIGWLAL LLLSLQPVAD 
RLLRPIESTY PTWNNSQKVD YIVVLGGGYT WNPQWAPSSN LINNSLPRLN EGIRLWRENP
GSKLIFTGGV AKTNTVSTAE VGARVAQSLG VPREQIITLD LPKDTEEEAA AVKQAIGDAP
FLLVTSASHL PRAMIFFQQE GLNPLPAPAN QLAIDSPLNP WERAIPSPVW LMHSDRVGYE
TLGRIWQWLK GSSGEPRQE